Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia
Trichoderma asperellum PK1J2 is a promising cellulase-producing fungus isolated from a palm empty fruit bunch in Riau, Indonesia. Presented here is the genome assembly of T. asperellum PK1J2. The whole genome of the fungi was sequenced using Illumina NovaSeq PE150. The genome assembly was performed...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Elsevier Inc.
2022
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| Online Access: | https://repository.ugm.ac.id/282803/1/1-s2.0-S2352340922008137-main.pdf |
| _version_ | 1826050553021464576 |
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| author | Hidayati, Fela Laila Nur Suroto, Dian Anggraini Sardjono, Sardjono Cahyanto, Muhammad Nur Widada, Jaka |
| author_facet | Hidayati, Fela Laila Nur Suroto, Dian Anggraini Sardjono, Sardjono Cahyanto, Muhammad Nur Widada, Jaka |
| author_sort | Hidayati, Fela Laila Nur |
| collection | UGM |
| description | Trichoderma asperellum PK1J2 is a promising cellulase-producing fungus isolated from a palm empty fruit bunch in Riau, Indonesia. Presented here is the genome assembly of T. asperellum PK1J2. The whole genome of the fungi was sequenced using Illumina NovaSeq PE150. The genome assembly was performed using SOAPdenovo, SPAdes, and Abyss software, and the assembly results of the three types of software were integrated with CISA software. T. asperellum PK1J2 has 6,835 protein-coding genes with a length of 9,233,597 bp. The final genome assembly was approximately 36 Mbp with a GC content of 48.45. This whole genome shotgun project has been deposited at DDBJ/ENA/GenBank under accession JAGJIK000000000. |
| first_indexed | 2024-03-14T00:05:48Z |
| format | Article |
| id | oai:generic.eprints.org:282803 |
| institution | Universiti Gadjah Mada |
| language | English |
| last_indexed | 2024-03-14T00:05:48Z |
| publishDate | 2022 |
| publisher | Elsevier Inc. |
| record_format | dspace |
| spelling | oai:generic.eprints.org:2828032024-01-02T06:09:51Z https://repository.ugm.ac.id/282803/ Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia Hidayati, Fela Laila Nur Suroto, Dian Anggraini Sardjono, Sardjono Cahyanto, Muhammad Nur Widada, Jaka Genomics Crop and Pasture Production Trichoderma asperellum PK1J2 is a promising cellulase-producing fungus isolated from a palm empty fruit bunch in Riau, Indonesia. Presented here is the genome assembly of T. asperellum PK1J2. The whole genome of the fungi was sequenced using Illumina NovaSeq PE150. The genome assembly was performed using SOAPdenovo, SPAdes, and Abyss software, and the assembly results of the three types of software were integrated with CISA software. T. asperellum PK1J2 has 6,835 protein-coding genes with a length of 9,233,597 bp. The final genome assembly was approximately 36 Mbp with a GC content of 48.45. This whole genome shotgun project has been deposited at DDBJ/ENA/GenBank under accession JAGJIK000000000. Elsevier Inc. 2022-12 Article PeerReviewed application/pdf en https://repository.ugm.ac.id/282803/1/1-s2.0-S2352340922008137-main.pdf Hidayati, Fela Laila Nur and Suroto, Dian Anggraini and Sardjono, Sardjono and Cahyanto, Muhammad Nur and Widada, Jaka (2022) Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia. Data in Brief, 45. ISSN 23523409 https://www.scopus.com/inward/record.uri?eid=2-s2.0-85138555441&doi=10.1016%2fj.dib.2022.108607&partnerID=40&md5=71e56eb9d009c05dcbc0fda3e0f4c896 10.1016/j.dib.2022.108607 |
| spellingShingle | Genomics Crop and Pasture Production Hidayati, Fela Laila Nur Suroto, Dian Anggraini Sardjono, Sardjono Cahyanto, Muhammad Nur Widada, Jaka Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia |
| title | Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia |
| title_full | Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia |
| title_fullStr | Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia |
| title_full_unstemmed | Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia |
| title_short | Whole-genome sequence data of cellulase-producing fungi Trichoderma asperellum PK1J2, isolated from palm empty fruit bunch in Riau, Indonesia |
| title_sort | whole genome sequence data of cellulase producing fungi trichoderma asperellum pk1j2 isolated from palm empty fruit bunch in riau indonesia |
| topic | Genomics Crop and Pasture Production |
| url | https://repository.ugm.ac.id/282803/1/1-s2.0-S2352340922008137-main.pdf |
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