Construction of gene coexpression networks and transcriptomic analysis for Rhizobium leguminosarum

Construction of gene coexpression networks and transcriptomic analysis for Rhizobium leguminosarum

<p>Rhizobium leguminosarum is a soil bacteria which infects plants of the legume family such as peas, lentils, and beans. When associated with the plant, R. leguminosarum fixes atmospheric nitrogen (biological nitrogen fixation), producing ammonium that is assimilated by the plant, improving p...

Fuld beskrivelse

Bibliografiske detaljer
Hovedforfatter:	Pardo Díaz, J
Andre forfattere:	Reinert, G
Format:	Thesis
Sprog:	English
Udgivet:	2022
Fag:	Bioinformatics Microbiology Statistics

Lignende værker

Extracting information from gene coexpression networks of Rhizobium leguminosarum
af: Pardo-Diaz, J, et al.
Udgivet: (2022)

Genome-wide identification of colonisation determinants in rhizobium leguminosarum using BarSeq
af: Knights, H
Udgivet: (2021)

Investigating the basis of competitive nodulation and bacteroid development in Rhizobium leguminosarum
af: Ford, BL
Udgivet: (2021)

Genome-scale characterisation of symbiotic fitness determinants of Rhizobium leguminosarum using INSeq
af: Wheatley, R
Udgivet: (2018)

Transcriptomic analysis of Rhizobium leguminosarum bacteroids in determinate and indeterminate nodules
af: Green, RT, et al.
Udgivet: (2019)

Housekeeping genes essential for pantothenate biosynthesis are plasmid-encoded in <it>Rhizobium etli </it>and <it>Rhizobium leguminosarum</it>
af: los Santos Alejandro, et al.
Udgivet: (2011-04-01)

Characterization and functional analysis of seven flagellin genes in <it>Rhizobium leguminosarum </it>bv. <it>viciae</it>. Characterization of <it>R. leguminosarum </it>flagellins
af: Tambalo Dinah D, et al.
Udgivet: (2010-08-01)

Network analysis of hyphae forming proteins in Candida albicans identifies important proteins responsible for pathovirulence in the organism
af: Sanjib Das, et al.
Udgivet: (2019-06-01)

Molecular analysis of Rhizobium sp. dehalogenase regulator gene /
af: Cooper, Ronald A., et al.
Udgivet: (2002)

Adaptation of Rhizobium leguminosarum to pea, alfalfa and sugar beet rhizospheres investigated by comparative transcriptomics.
af: Ramachandran, V, et al.
Udgivet: (2011)

dpp Genes of Rhizobium leguminosarum Specify Uptake of δ-Aminolevulinic Acid
af: R. A. Carter, et al.
Udgivet: (2002-01-01)

Regulation and Characterization of Mutants of fixABCX in Rhizobium leguminosarum
af: Isabel U. C. Webb, et al.
Udgivet: (2021-10-01)

Regulation and characterization of mutants of fixABCX in Rhizobium leguminosarum
af: Webb, I, et al.
Udgivet: (2021)

Transcriptomic analysis of Rhizobium leguminosarum biovar viciae in symbiosis with host plants Pisum sativum and Vicia cracca.
af: Karunakaran, R, et al.
Udgivet: (2009)

The Rhizobium GstI Protein Reduces the NH4+ Assimilation Capacity of Rhizobium leguminosarum
af: Rosarita Tatè, et al.
Udgivet: (2001-07-01)

The genetic control of root attachment and colonisation in Rhizobium leguminosarum
af: Cocker, C
Udgivet: (2023)

The purMN Genes of Rhizobium leguminosarum and a Superficial Link with Siderophore Production
af: James B. Stevens, et al.
Udgivet: (2000-02-01)

Bacterial genospecies that are not ecologically coherent: population genomics of Rhizobium leguminosarum
af: Nitin Kumar, et al.
Udgivet: (2015-01-01)

Protocol for the construction and functional profiling of metagenome-assembled genomes for microbiome analyses
af: Goutam Banerjee, et al.
Udgivet: (2024-09-01)

Genome-scale metabolic modelling of lifestyle changes in Rhizobium leguminosarum
af: Schulte, CCM, et al.
Udgivet: (2022)

Effect of additional inoculation with Rhizobium leguminosarum on vegetable pea plants
af: O. V. Putina, et al.
Udgivet: (2024-07-01)

The effect of biotic and physical factors on the competitive ability of Rhizobium leguminosarum
af: Wielbo Jerzy, et al.
Udgivet: (2012-02-01)

Genome-Scale Metabolic Modelling of Lifestyle Changes in Rhizobium leguminosarum
af: Carolin C. M. Schulte, et al.
Udgivet: (2022-02-01)

Deep learning based protocol to construct an immune-related gene network of host-pathogen interactions in plants
af: Ravi Kumar, et al.
Udgivet: (2023-03-01)

Role and regulation of chemotaxis and motility in the Rhizobium-legume symbiosis
af: Aroney, S
Udgivet: (2021)

Interpretable machine learning reveals microbiome signatures strongly associated with dairy cow milk urea nitrogen
af: Qingyuan Yu, et al.
Udgivet: (2024-06-01)

Characterization of the nodulation plasmid encoded chemoreceptor gene <it>mcpG </it>from <it>Rhizobium leguminosarum</it>
af: Del Bel Kate L, et al.
Udgivet: (2003-01-01)

Deciphering COVID-19 host transcriptomic complexity and variations for therapeutic discovery against new variants
af: Jing Xing, et al.
Udgivet: (2022-10-01)

Identification of genes and functional coexpression modules closely related to ulcerative colitis by gene datasets analysis
af: Jie Zhu, et al.
Udgivet: (2019-11-01)

Gene coexpression analysis in Arabidopsis thaliana based on public microarray data
af: Vasileios L. Zogopoulos, et al.
Udgivet: (2022-03-01)

Extracción de adn plasmidico de cepas de rhizobium leguminosarum
af: M. Y, Cortés L., et al.
Udgivet: (2010-07-01)

Characterization of the quaternary amine transporters of Rhizobium leguminosarum bv. viciae 3841.
af: Fox, M, et al.
Udgivet: (2008)

Weighted Gene Coexpression Network Analysis Identifies Specific Modules and Hub Genes Related to Major Depression
af: Zhang G, et al.
Udgivet: (2020-03-01)

Cloning and Characterization of Four Genes of Rhizobium leguminosarum bv. trifolii Involved in Exopolysaccharide Production and Nodulation
af: Wilbert A. T. van Workum, et al.
Udgivet: (1997-03-01)

Complete genome of Rhizobium leguminosarum Norway, an ineffective Lotus micro-symbiont
af: Juan Liang, et al.
Udgivet: (2018-12-01)

Draft genome of the strain RCAM1026 Rhizobium leguminosarum bv. viciae
af: Alexey Afonin, et al.
Udgivet: (2017-03-01)

Isolation and Characterization Salt Tolerant Strains Of Rhizobium leguminosarum bv. Viciae
af: I.A. Hussein, et al.
Udgivet: (2019-06-01)

Intragenomic diversity of <it>Rhizobium leguminosarum </it>bv. <it>trifolii </it>clover nodule isolates
af: Marek-Kozaczuk Monika, et al.
Udgivet: (2011-05-01)

PRODUCTION OF EXOPOLYSACCHARIDE FROM LOCAL ISOLATES OF Rhizobium leguminosarum biovar viciae
af: Wjdan Al-Obaidy
Udgivet: (2031-08-01)

The study of symbiotic and phosphate solubility efficiency of Rhizobium leguminosarum bv. Viciae
af: maryam ghazaeiyan, et al.
Udgivet: (2009-06-01)