Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction

Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction

Diffusion MRI data can be affected by hardware and subject-related artefacts that can adversely affect downstream analyses. Therefore, automated quality control (QC) is of great importance, especially in large population studies where visual QC is not practical. In this work, we introduce an automat...

Disgrifiad llawn

Manylion Llyfryddiaeth
Prif Awduron:	Bastiani, M, Cottaar, M, Fitzgibbon, S, Suri, S, Alfaro-Almagro, F, Sotiropoulos, S, Jbabdi, S, Andersson, J
Fformat:	Journal article
Iaith:	English
Cyhoeddwyd:	Elsevier 2018

Eitemau Tebyg

Incorporating outlier detection and replacement into a non-parametric framework for movement and distortion correction of diffusion MR images
gan: Andersson, J, et al.
Cyhoeddwyd: (2016)

Towards a comprehensive framework for movement and distortion correction of diffusion MR images: within volume movement
gan: Andersson, J, et al.
Cyhoeddwyd: (2017)

Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project
gan: Bastiani, M, et al.
Cyhoeddwyd: (2018)

Joint modelling of diffusion MRI and microscopy
gan: Howard, A, et al.
Cyhoeddwyd: (2019)

Modelling fibre fanning in diffusion-weighted MRI.
gan: Sotiropoulos, SN, et al.
Cyhoeddwyd: (2012)

Non-parametric representation and prediction of single- and multi-shell diffusion-weighted MRI data using Gaussian processes
gan: Andersson, J, et al.
Cyhoeddwyd: (2015)

Ball and rackets: Inferring fiber fanning from diffusion-weighted MRI.
gan: Sotiropoulos, SN, et al.
Cyhoeddwyd: (2012)

RubiX: combining spatial resolutions for Bayesian inference of crossing fibers in diffusion MRI.
gan: Sotiropoulos, SN, et al.
Cyhoeddwyd: (2013)

Functional and diffusion MRI reveal the neurophysiological basis of neonates’ noxious-stimulus evoked brain activity
gan: Baxter, L, et al.
Cyhoeddwyd: (2021)

Identifying microstructural changes in diffusion MRI; How to circumvent parameter degeneracy
gan: Hossein Rafipoor, et al.
Cyhoeddwyd: (2022-10-01)

Improved fibre dispersion estimation using b-tensor encoding
gan: Cottaar, M, et al.
Cyhoeddwyd: (2020)

Modelling white matter in gyral blades as a continuous vector field
gan: Cottaar, M, et al.
Cyhoeddwyd: (2020)

A gyral coordinate system predictive of fibre orientations
gan: Cottaar, M, et al.
Cyhoeddwyd: (2018)

Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging.
gan: Mollink, J, et al.
Cyhoeddwyd: (2017)

Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes
gan: Hernandez-Fernandez, M, et al.
Cyhoeddwyd: (2018)

Improved tractography using asymmetric fibre orientation distributions
gan: Bastiani, M, et al.
Cyhoeddwyd: (2017)

Functional and diffusion MRI reveal the neurophysiological basis of neonates’ noxious-stimulus evoked brain activity
gan: Luke Baxter, et al.
Cyhoeddwyd: (2021-05-01)

MR Diffusion Tractography
gan: Behrens, T, et al.
Cyhoeddwyd: (2013)

Fusion in diffusion MRI for improved fibre orientation estimation: An application to the 3T and 7T data of the Human Connectome Project
gan: Sotiropoulos, S, et al.
Cyhoeddwyd: (2016)

Improved fibre dispersion estimation using b-tensor encoding
gan: Michiel Cottaar, et al.
Cyhoeddwyd: (2020-07-01)

DACO: Distortion/artefact correction for diffusion MRI data
gan: Yung-Chin Hsu, et al.
Cyhoeddwyd: (2022-11-01)

Advances in diffusion MRI acquisition and processing in the Human Connectome Project
gan: Sotiropoulos, SN, et al.
Cyhoeddwyd: (2013)

Advances in diffusion MRI acquisition and processing in the Human Connectome Project.
gan: Sotiropoulos, SN, et al.
Cyhoeddwyd: (2013)

Time‐efficient and flexible design of optimized multishell HARDI diffusion
gan: Hutter, J, et al.
Cyhoeddwyd: (2017)

Modelling an equivalent b-value in diffusion-weighted steady-state free precession
gan: Tendler, B, et al.
Cyhoeddwyd: (2020)

Building connectomes using diffusion MRI: Why, how and but
gan: Sotiropoulos, S, et al.
Cyhoeddwyd: (2017)

Concurrent mapping of brain ontogeny and phylogeny within a common space: standardized tractography and applications
gan: Warrington, S, et al.
Cyhoeddwyd: (2022)

Cross-Subject Comparison of Local Diffusion MRI Parameters
gan: Smith, S, et al.
Cyhoeddwyd: (2013)

Quantifying myelin in crossing fibers using diffusion-prepared phase imaging: theory and simulations
gan: Cottaar, M, et al.
Cyhoeddwyd: (2021)

Effects of image reconstruction on fiber orientation mapping from multichannel diffusion MRI: reducing the noise floor using SENSE.
gan: Sotiropoulos, SN, et al.
Cyhoeddwyd: (2013)

Modelling white matter in gyral blades as a continuous vector field
gan: Michiel Cottaar, et al.
Cyhoeddwyd: (2021-02-01)

Reducing Susceptibility Distortion Related Image Blurring in Diffusion MRI EPI Data
gan: Ian A. Clark, et al.
Cyhoeddwyd: (2021-08-01)

Sampling strategies and integrated reconstruction for reducing distortion and boundary slice aliasing in high-resolution 3D diffusion MRI
gan: Li, Z, et al.
Cyhoeddwyd: (2023)

Model-based analysis of multishell diffusion MR data for tractography: How to get over fitting problems
gan: Jbabdi, S, et al.
Cyhoeddwyd: (2012)

Model-based analysis of multishell diffusion MR data for tractography: how to get over fitting problems.
gan: Jbabdi, S, et al.
Cyhoeddwyd: (2012)

Evaluation of Six Phase Encoding Based Susceptibility Distortion Correction Methods for Diffusion MRI
gan: Xuan Gu, et al.
Cyhoeddwyd: (2019-12-01)

Effects of image reconstruction on fiber orientation mapping from multichannel diffusion MRI: Reducing the noise floor using SENSE
gan: Sotiropoulos, S, et al.
Cyhoeddwyd: (2013)

Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps.
gan: Kurt G Schilling, et al.
Cyhoeddwyd: (2020-01-01)

Connectivity-based segmentation of the periaqueductal gray matter in human with brainstem optimized diffusion MRI.
gan: Ezra, M, et al.
Cyhoeddwyd: (2014)

Unraveling the multiscale structural organization and connectivity of the human brain: the role of diffusion MRI
gan: Matteo eBastiani, et al.
Cyhoeddwyd: (2015-06-01)