Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.

We describe a web server, which provides easy access to the SLoop database of loop conformations connecting elements of protein secondary structure. The loops are classified according to their length, the type of bounding secondary structures and the conformation of the mainchain. The current releas...

Full description

Bibliographic Details
Main Authors: Burke, D, Deane, C, Blundell, T
Format: Journal article
Language:English
Published: 2000
_version_ 1797053393229840384
author Burke, D
Deane, C
Blundell, T
author_facet Burke, D
Deane, C
Blundell, T
author_sort Burke, D
collection OXFORD
description We describe a web server, which provides easy access to the SLoop database of loop conformations connecting elements of protein secondary structure. The loops are classified according to their length, the type of bounding secondary structures and the conformation of the mainchain. The current release of the database consists of over 8000 loops of up to 20 residues in length. A loop prediction method, which selects conformers on the basis of the sequence and the positions of the elements of secondary structure, is also implemented. These web pages are freely accessible over the internet at http://www-cryst.bioc.cam.ac.uk/ approximately sloop.
first_indexed 2024-03-06T18:43:06Z
format Journal article
id oxford-uuid:0d91afe6-ac15-4e35-b324-e9718c164d27
institution University of Oxford
language English
last_indexed 2024-03-06T18:43:06Z
publishDate 2000
record_format dspace
spelling oxford-uuid:0d91afe6-ac15-4e35-b324-e9718c164d272022-03-26T09:41:20ZBrowsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.Journal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:0d91afe6-ac15-4e35-b324-e9718c164d27EnglishSymplectic Elements at Oxford2000Burke, DDeane, CBlundell, TWe describe a web server, which provides easy access to the SLoop database of loop conformations connecting elements of protein secondary structure. The loops are classified according to their length, the type of bounding secondary structures and the conformation of the mainchain. The current release of the database consists of over 8000 loops of up to 20 residues in length. A loop prediction method, which selects conformers on the basis of the sequence and the positions of the elements of secondary structure, is also implemented. These web pages are freely accessible over the internet at http://www-cryst.bioc.cam.ac.uk/ approximately sloop.
spellingShingle Burke, D
Deane, C
Blundell, T
Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.
title Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.
title_full Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.
title_fullStr Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.
title_full_unstemmed Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.
title_short Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure.
title_sort browsing the sloop database of structurally classified loops connecting elements of protein secondary structure
work_keys_str_mv AT burked browsingthesloopdatabaseofstructurallyclassifiedloopsconnectingelementsofproteinsecondarystructure
AT deanec browsingthesloopdatabaseofstructurallyclassifiedloopsconnectingelementsofproteinsecondarystructure
AT blundellt browsingthesloopdatabaseofstructurallyclassifiedloopsconnectingelementsofproteinsecondarystructure