A mini-greedy algorithm for faster structural RNA stem-loop search.

A mini-greedy algorithm for faster structural RNA stem-loop search.

When a set of coregulated genes share a common structural RNA motif, e.g. a hairpin, most motif search approaches fail to locate the covarying but structurally conserved motif. There do exist methods that can locate structural RNA motifs, like FOLDALIGN, but the main problem with these methods is th...

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Autors principals:	Gorodkin, J, Lyngso, R, Stormo, G
Format:	Journal article
Idioma:	English
Publicat:	2001

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