Image-based consensus molecular subtype classification (imCMS) of colorectal cancer using deep learning

Image-based consensus molecular subtype classification (imCMS) of colorectal cancer using deep learning

<p><strong>Objective:</strong> Complex phenotypes captured on histological slides represent the biological processes at play in individual cancers but the link to underlying molecular classification has not been clarified or systematised. In colorectal cancer (CRC), histological gr...

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí:	Sirinukunwattana, K, Domingo-Villanueva, E, Richman, S, Blake, A, Verrill, C, Leedham, SJ, Wu, C-H, Maughan, T, Rittscher, J, Koelzer, VH
Formáid:	Journal article
Teanga:	English
Foilsithe / Cruthaithe:	BMJ Publishing Group 2020

Míreanna comhchosúla

Image-based consensus molecular subtyping in rectal cancer biopsies and response to neoadjuvant chemoradiotherapy
de réir: Lafarge, MW, et al.
Foilsithe / Cruthaithe: (2024)

Towards the identification of histology based subtypes in prostate cancer
de réir: Chatrian, A, et al.
Foilsithe / Cruthaithe: (2019)

Image-based consensus molecular subtyping in rectal cancer biopsies and response to neoadjuvant chemoradiotherapy
de réir: Maxime W. Lafarge, et al.
Foilsithe / Cruthaithe: (2024-04-01)

Consensus molecular subtypes (CMS) in metastatic colorectal cancer - personalized medicine decision
de réir: Rebersek Martina
Foilsithe / Cruthaithe: (2020-05-01)

Enhancing local context of histology features in vision transformers
de réir: Wood, R, et al.
Foilsithe / Cruthaithe: (2022)

Precision immunoprofiling by image analysis and artificial intelligence
de réir: Koelzer, V, et al.
Foilsithe / Cruthaithe: (2018)

Improving whole slide segmentation through visual context: a systematic study
de réir: Sirinukunwattana, K, et al.
Foilsithe / Cruthaithe: (2018)

Pathway level subtyping identifies a slow-cycling biological phenotype associated with poor clinical outcomes in colorectal cancer
de réir: Malla, SB, et al.
Foilsithe / Cruthaithe: (2024)

Everolimus and plicamycin specifically target chemoresistant colorectal cancer cells of the CMS4 subtype
de réir: Jiayin Deng, et al.
Foilsithe / Cruthaithe: (2021-10-01)

Metastatic heterogeneity of the consensus molecular subtypes of colorectal cancer
de réir: Peter W. Eide, et al.
Foilsithe / Cruthaithe: (2021-07-01)

Consensus molecular subtype 4 (CMS4)-targeted therapy in primary colon cancer: A proof-of-concept study
de réir: Niek A. Peters, et al.
Foilsithe / Cruthaithe: (2022-09-01)

A Transcription Factor Signature Can Identify the CMS4 Subtype and Stratify the Prognostic Risk of Colorectal Cancer
de réir: Min-Er Zhong, et al.
Foilsithe / Cruthaithe: (2022-06-01)

Profiling the heterogeneity of colorectal cancer consensus molecular subtypes using spatial transcriptomics
de réir: Alberto Valdeolivas, et al.
Foilsithe / Cruthaithe: (2024-01-01)

Genomic landscape and expression profile of consensus molecular subtype four of colorectal cancer
de réir: Yujie Lu, et al.
Foilsithe / Cruthaithe: (2023-06-01)

Neoantigen-specific immunity in low mutation burden colorectal cancers of the consensus molecular subtype 4
de réir: Jitske van den Bulk, et al.
Foilsithe / Cruthaithe: (2019-12-01)

Prospective patient stratification into robust cancer-cell intrinsic subtypes from colorectal cancer biopsies
de réir: Alderdice, M, et al.
Foilsithe / Cruthaithe: (2018)

Multilevel genomics of colorectal cancers with microsatellite instability—clinical impact of JAK1 mutations and consensus molecular subtype 1
de réir: Anita Sveen, et al.
Foilsithe / Cruthaithe: (2017-05-01)

Seed and Soil: Consensus Molecular Subgroups (CMS) and Tumor Microenvironment Features Between Primary Lesions and Metastases of Different Organ Sites in Colorectal Cancer
de réir: Luo Q, et al.
Foilsithe / Cruthaithe: (2024-03-01)

TP53 mutation status and consensus molecular subtypes of colorectal cancer in patients from Rwanda
de réir: Augustin Nzitakera, et al.
Foilsithe / Cruthaithe: (2024-10-01)

Microenvironment, systemic inflammatory response and tumor markers considering consensus molecular subtypes of colorectal cancer
de réir: Anna Jakab, et al.
Foilsithe / Cruthaithe: (2024-04-01)

Identifying essential genes in genome-scale metabolic models of consensus molecular subtypes of colorectal cancer.
de réir: Chao-Ting Cheng, et al.
Foilsithe / Cruthaithe: (2023-01-01)

Multiregional transcriptomics identifies congruent consensus subtypes with prognostic value beyond tumor heterogeneity of colorectal cancer
de réir: Jonas Langerud, et al.
Foilsithe / Cruthaithe: (2024-05-01)

A proliferative subtype of colorectal liver metastases exhibits hypersensitivity to cytotoxic chemotherapy
de réir: Liam F. Spurr, et al.
Foilsithe / Cruthaithe: (2022-10-01)

A graph based neural network approach to immune profiling of multiplexed tissue samples
de réir: Martin, NG, et al.
Foilsithe / Cruthaithe: (2022)

Ink removal from histopathology whole slide images by combining classification, detection and image generation models
de réir: Ali, S, et al.
Foilsithe / Cruthaithe: (2019)

A panel of DNA methylation markers for the classification of consensus molecular subtypes 2 and 3 in patients with colorectal cancer
de réir: Inge van denBerg, et al.
Foilsithe / Cruthaithe: (2021-12-01)

Artificial intelligence for advance requesting of immunohistochemistry in diagnostically uncertain prostate biopsies
de réir: Chatrian, A, et al.
Foilsithe / Cruthaithe: (2021)

Automating the CMS DAQ
de réir: Bauer, Gerry P, et al.
Foilsithe / Cruthaithe: (2019)

The potential of artificial intelligence to detect lymphovascular invasion in testicular cancer
de réir: Ghosh, A, et al.
Foilsithe / Cruthaithe: (2021)

Automated quality assessment of large digitised histology cohorts by artificial intelligence
de réir: Haghighat, M, et al.
Foilsithe / Cruthaithe: (2022)

Consensus molecular subtyping of colorectal carcinoma brain metastases reveals a metabolic signature associated with poor patient survival
de réir: Barnabas Irmer, et al.
Foilsithe / Cruthaithe: (2025-03-01)

Characterizing heterogeneity along EMT and metabolic axes in colorectal cancer reveals underlying consensus molecular subtype-specific trends
de réir: Manas Sehgal, et al.
Foilsithe / Cruthaithe: (2024-02-01)

Bone morphogenetic protein and Notch signalling crosstalk in poor-prognosis, mesenchymal-subtype colorectal cancer.
de réir: Irshad, S, et al.
Foilsithe / Cruthaithe: (2017)

Bone Morphogenetic Protein and Notch signaling crosstalk in poor-prognosis, mesenchymal-subtype colorectal cancer
de réir: Irshad, S, et al.
Foilsithe / Cruthaithe: (2017)

Comparative analysis of mitochondrial genomes of maize CMS-S subtypes provides new insights into male sterility stability
de réir: Senlin Xiao, et al.
Foilsithe / Cruthaithe: (2022-10-01)

The CMS electronic logbook
de réir: Ma, Fermi P., et al.
Foilsithe / Cruthaithe: (2013)

The CMS Collaboration
de réir: Abbaneo, D, et al.
Foilsithe / Cruthaithe: (2009)

Exotica in CMS
de réir: Wulz Claudia-Elisabeth
Foilsithe / Cruthaithe: (2016-01-01)

The interleukin 22 pathway interacts with mutant KRAS to promote poor prognosis in colon cancer.
de réir: McCuaig, S, et al.
Foilsithe / Cruthaithe: (2020)

Molecular subtypes of leiomyosarcoma: Moving toward a consensus
de réir: Jessica Burns, et al.
Foilsithe / Cruthaithe: (2022-12-01)