Gibbs sampler for statistical multiple alignment

For a set of sequences, related by a binary tree, that have evolved according to the Thorne-Kishino-Felsenstein model, a Gibbs sampler is presented for simulating the ancestral sequences and their alignments. The updating step consists in updating the ancestral sequence and its three alignments with...

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Bibliographic Details
Main Authors: Jensen, J, Hein, J
Format: Journal article
Language:English
Published: 2005