Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases

Microbiome-wide association studies on large population cohorts have highlighted associations between the gut microbiome and complex traits, including type 2 diabetes (T2D) and obesity1. However, the causal relationships remain largely unresolved. We leveraged information from 952 normoglycemic indi...

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Main Authors: Sanna, S, Van Zuydam, NR, Mahajan, A, Kurilshikov, A, Vila, AV, Võsa, U, Mujagic, Z, Masclee, AAM, Jonkers, DMAE, Oosting, M, Joosten, LAB, Netea, MG, Franke, L, Zhernakova, A, Fu, J, Wijmenga, C, McCarthy, M
Format: Journal article
Published: Springer Nature 2019
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author Sanna, S
Van Zuydam, NR
Mahajan, A
Kurilshikov, A
Vila, AV
Võsa, U
Mujagic, Z
Masclee, AAM
Jonkers, DMAE
Oosting, M
Joosten, LAB
Netea, MG
Franke, L
Zhernakova, A
Fu, J
Wijmenga, C
McCarthy, M
author_facet Sanna, S
Van Zuydam, NR
Mahajan, A
Kurilshikov, A
Vila, AV
Võsa, U
Mujagic, Z
Masclee, AAM
Jonkers, DMAE
Oosting, M
Joosten, LAB
Netea, MG
Franke, L
Zhernakova, A
Fu, J
Wijmenga, C
McCarthy, M
author_sort Sanna, S
collection OXFORD
description Microbiome-wide association studies on large population cohorts have highlighted associations between the gut microbiome and complex traits, including type 2 diabetes (T2D) and obesity1. However, the causal relationships remain largely unresolved. We leveraged information from 952 normoglycemic individuals for whom genome-wide genotyping, gut metagenomic sequence and fecal short-chain fatty acid (SCFA) levels were available2, then combined this information with genome-wide-association summary statistics for 17 metabolic and anthropometric traits. Using bidirectional Mendelian randomization (MR) analyses to assess causality3, we found that the host-genetic-driven increase in gut production of the SCFA butyrate was associated with improved insulin response after an oral glucose-tolerance test (P = 9.8 × 10−5), whereas abnormalities in the production or absorption of another SCFA, propionate, were causally related to an increased risk of T2D (P = 0.004). These data provide evidence of a causal effect of the gut microbiome on metabolic traits and support the use of MR as a means to elucidate causal relationships from microbiome-wide association findings.
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spelling oxford-uuid:4a35177d-3dc5-4784-831e-9d500f1f878b2022-03-26T15:36:15ZCausal relationships among the gut microbiome, short-chain fatty acids and metabolic diseasesJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:4a35177d-3dc5-4784-831e-9d500f1f878bSymplectic Elements at OxfordSpringer Nature2019Sanna, SVan Zuydam, NRMahajan, AKurilshikov, AVila, AVVõsa, UMujagic, ZMasclee, AAMJonkers, DMAEOosting, MJoosten, LABNetea, MGFranke, LZhernakova, AFu, JWijmenga, CMcCarthy, MMicrobiome-wide association studies on large population cohorts have highlighted associations between the gut microbiome and complex traits, including type 2 diabetes (T2D) and obesity1. However, the causal relationships remain largely unresolved. We leveraged information from 952 normoglycemic individuals for whom genome-wide genotyping, gut metagenomic sequence and fecal short-chain fatty acid (SCFA) levels were available2, then combined this information with genome-wide-association summary statistics for 17 metabolic and anthropometric traits. Using bidirectional Mendelian randomization (MR) analyses to assess causality3, we found that the host-genetic-driven increase in gut production of the SCFA butyrate was associated with improved insulin response after an oral glucose-tolerance test (P = 9.8 × 10−5), whereas abnormalities in the production or absorption of another SCFA, propionate, were causally related to an increased risk of T2D (P = 0.004). These data provide evidence of a causal effect of the gut microbiome on metabolic traits and support the use of MR as a means to elucidate causal relationships from microbiome-wide association findings.
spellingShingle Sanna, S
Van Zuydam, NR
Mahajan, A
Kurilshikov, A
Vila, AV
Võsa, U
Mujagic, Z
Masclee, AAM
Jonkers, DMAE
Oosting, M
Joosten, LAB
Netea, MG
Franke, L
Zhernakova, A
Fu, J
Wijmenga, C
McCarthy, M
Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
title Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
title_full Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
title_fullStr Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
title_full_unstemmed Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
title_short Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
title_sort causal relationships among the gut microbiome short chain fatty acids and metabolic diseases
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