Hydrogen-bonding patterns observed in the base pairs of duplex oligonucleotides

Hydrogen-bonding patterns observed in the base pairs of duplex oligonucleotides

Watson-Crick base pairing in duplex structures utilises a unique combination of hydrogen bond donors and acceptors to stabilise the association. This stability contributes to the fidelity of replication. Non-Watson-Crick base pairs, mismatches or base pairs involving chemically modified bases adopt...

Full description

Bibliographic Details
Main Authors:	Hunter, W, Leonard, G, Brown, T
Format:	Journal article
Language:	English
Published:	1998

Similar Items

Do C-H...O hydrogen bonds contribute to the stability of nucleic acid base pairs?
by: Leonard, G, et al.
Published: (1995)

Four hydrogen-bonding motifs in oligonucleotides
by: Noriaki Minakawa, et al.
Published: (2006-01-01)

Crystal structure of a DNA duplex containing 8-hydroxydeoxyguanine-adenine base pairs.
by: McAuley-Hecht, K, et al.
Published: (1994)

Inosine.adenine base pairs in a B-DNA duplex.
by: Corfield, P, et al.
Published: (1987)

Refined crystal structure of an octanucleotide duplex with G . T mismatched base-pairs.
by: Hunter, W, et al.
Published: (1986)

MISMATCHES IN DNA DUPLEXES
by: Brown, T, et al.
Published: (1993)

Comparison of the electrophoretic and hydrodynamic properties of DNA and RNA oligonucleotide duplexes.
by: Bonifacio, G, et al.
Published: (1997)

Refined crystal structure of an octanucleotide duplex with I.T. mismatched base pairs.
by: Cruse, W, et al.
Published: (1989)

Properties of multiple G.A mismatches in stable oligonucleotide duplexes.
by: Lane, A, et al.
Published: (1994)

Crystal and molecular structure of r(CGCGAAUUAGCG): an RNA duplex containing two G(anti).A(anti) base pairs.
by: Leonard, G, et al.
Published: (1994)

Hydrogen Bonding (Base Pairing) in Antiviral Activity
by: Erik De Clercq
Published: (2023-05-01)

Selectivity and affinity of triplex-forming oligonucleotides containing 2'-aminoethoxy-5-(3-aminoprop-1-ynyl)uridine for recognizing AT base pairs in duplex DNA.
by: Osborne, S, et al.
Published: (2004)

STUDIES OF THE STRUCTURE AND STABILITY OF BASE-PAIR MISMATCHES, BASE-PAIRS INVOLVING MODIFIED BASES, AND DNA-DRUG COMPLEXES
by: Leonard, G, et al.
Published: (1994)

Crystal structure and stability of a DNA duplex containing A(anti).G(syn) base-pairs.
by: Brown, T, et al.
Published: (1989)

Biophysical Studies of Oligonucleotides Containing Duplex Stabilising Modifications
by: Marafini, P
Published: (2016)

Recognition of RNA duplexes by chemically modified triplex-forming oligonucleotides
by: Zhou, Y., et al.
Published: (2013)

Structure of the DNA duplex d(ATTAAT)2 with Hoogsteen hydrogen bonds.
by: Francisco J Acosta-Reyes, et al.
Published: (2015-01-01)

Design of thiazole orange oligonucleotide probes for detection of DNA and RNA by fluorescence and duplex melting
by: Klimkowski, P, et al.
Published: (2019)

Covalently attached intercalators restore duplex stability and splice-switching activity to triazole-modified oligonucleotides
by: Dysko, A, et al.
Published: (2022)

Hydrogen bonding in duplex DNA probed by DNP enhanced solid-state NMR N-H bond length measurements
by: Lakshmi Bhai, et al.
Published: (2023-12-01)

Studies of oligonucleotide interactions by hybridisation to arrays: the influence of dangling ends on duplex yield.
by: Williams, J, et al.
Published: (1994)

Analysis of structural flexibility of damaged DNA using thiol-tethered oligonucleotide duplexes.
by: Masashi Fujita, et al.
Published: (2015-01-01)

Analysis of Structural Flexibility of Damaged DNA Using Thiol-Tethered Oligonucleotide Duplexes.
by: Masashi Fujita, et al.
Published: (2015-01-01)

Unveiled electric profiles within hydrogen bonds suggest DNA base pairs with similar bond strengths.
by: Y B Ruiz-Blanco, et al.
Published: (2017-01-01)

Submicron patterning of DNA oligonucleotides on silicon.
by: Yin, H, et al.
Published: (2004)

Trans-hydrogen bond deuterium isotope effects of A:T base pairs in DNA.
by: Vakonakis, I, et al.
Published: (2004)

The conformational variability of an adenosine.inosine base-pair in a synthetic DNA dodecamer.
by: Leonard, G, et al.
Published: (1992)

Optimizing anti-gene oligonucleotide 'Zorro-LNA' for improved strand invasion into duplex DNA.
by: Zaghloul, E, et al.
Published: (2011)

Correction: Analysis of structural flexibility of damaged DNA using thiol-tethered oligonucleotide duplexes.
by: PLOS ONE Staff
Published: (2015-01-01)

Hammerhead ribozyme activity and oligonucleotide duplex stability in mixed solutions of water and organic compounds
by: Shu-ichi Nakano, et al.
Published: (2014-01-01)

Deuterium isotope effects and fractionation factors of hydrogen-bonded A:T base pairs of DNA.
by: Vakonakis, I, et al.
Published: (2003)

Hydration Waters Make Up for the Missing Third Hydrogen Bond in the A·T Base Pair
by: Chi H. Mak
Published: (2024-01-01)

Hydrogen Bonding in Natural and Unnatural Base Pairs—A Local Vibrational Mode Study
by: Nassim Beiranvand, et al.
Published: (2021-04-01)

Template method synthesis of highly fluorescent duplex oligonucleotide copper nanomaterials for Fe3+ sensing
by: Han Wuri, et al.
Published: (2020-01-01)

Synthesis and Excellent Duplex Stability of Oligonucleotides Containing 2′-Amino-LNA Functionalized with Galactose Units
by: Rajesh Kumar, et al.
Published: (2017-05-01)

Thermodynamic stability and drug-binding properties of oligodeoxyribonucleotide duplexes containing 3-deazaadenine:thymine base pairs.
by: Lever, C, et al.
Published: (1993)

Effects of structural variations on the hydrogen bond pairing between adenine derivatives and thymine
by: Valya Nikolova, et al.
Published: (2015-03-01)

N1...N3 hydrogen bonds of A:U base pairs of RNA are stronger than those of A:T base pairs of DNA.
by: Vakonakis, I, et al.
Published: (2004)

N1...N3 hydrogen bonds of A:U base pairs of RNA are stronger than those of A:T base pairs of DNA.
by: Vakonakis, I, et al.
Published: (2004)

Conformation of guanine-8-oxoadenine base pairs in the crystal structure of d(CGCGAATT(O8A)GCG).
by: Leonard, G, et al.
Published: (1992)