A unified genealogy of modern and ancient genomes

The sequencing of modern and ancient genomes from around the world has revolutionized our understanding of human history and evolution. However, the problem of how best to characterize ancestral relationships from the totality of human genomic variation remains unsolved. Here, we address this challe...

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Bibliographic Details
Main Authors: Wohns, AW, Wong, HY, Jeffery, B, Kelleher, J, McVean, G
Format: Journal article
Language:English
Published: American Association for the Advancement of Science 2022
Description
Summary:The sequencing of modern and ancient genomes from around the world has revolutionized our understanding of human history and evolution. However, the problem of how best to characterize ancestral relationships from the totality of human genomic variation remains unsolved. Here, we address this challenge with non-parametric methods that enable us to infer a unified genealogy of modern and ancient humans. This compact representation of multiple datasets explores the challenges of missing and erroneous data and uses ancient samples to constrain and date relationships. We demonstrate the power of the method to recover relationships between individuals and populations, as well as to identify descendants of ancient samples. Finally, we introduce a simple non-parametric estimator of ancestor geographical location that recapitulates key events in human history