CGAT: computational genomics analysis toolkit.

CGAT: computational genomics analysis toolkit.

Computational genomics seeks to draw biological inferences from genomic datasets, often by integrating and contextualizing next-generation sequencing data. CGAT provides an extensive suite of tools designed to assist in the analysis of genome scale data from a range of standard file formats. The too...

पूर्ण विवरण

ग्रंथसूची विवरण
मुख्य लेखकों:	Sims, D, Ilott, N, Sansom, S, Sudbery, I, Johnson, J, Fawcett, K, Berlanga-Taylor, A, Luna-Valero, S, Ponting, C, Heger, A
स्वरूप:	Journal article
भाषा:	English
प्रकाशित:	Oxford University Press 2014

समान संसाधन

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Sequencing depth and coverage: key considerations in genomic analyses.
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Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes.
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UMI-tools: Modelling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy.
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प्रकाशित: (2017)

Predicting long non-coding RNAs using RNA sequencing.
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प्रकाशित: (2013)

Predicting long non-coding RNAs using RNA sequencing
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An integrated toolkit for human microglia functional genomics
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Genomic response to vitamin D supplementation in the setting of a randomized, placebo-controlled trial
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Mobile computing with the Rover Toolkit
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Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia.
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A modular cloning toolkit for genome editing in plants
द्वारा: Hahn, F, और अन्य
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Next-generation sequencing of advanced prostate cancer treated with androgen-deprivation therapy.
द्वारा: Rajan, P, और अन्य
प्रकाशित: (2014)

Next-generation sequencing of advanced prostate cancer treated with androgen-deprivation therapy
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प्रकाशित: (2014)

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GAT: a simulation framework for testing the association of genomic intervals.
द्वारा: Heger, A, और अन्य
प्रकाशित: (2013)

GAT: a simulation framework for testing the association of genomic intervals
द्वारा: Heger, A, और अन्य
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JCVI: A versatile toolkit for comparative genomics analysis
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A genomic toolkit for winged bean Psophocarpus tetragonolobus
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प्रकाशित: (2024-03-01)

Comparative genomics of vertebrates
द्वारा: Ponting, C, और अन्य
प्रकाशित: (2005)

Vision on tap : an online computer vision toolkit
द्वारा: Chiu, Kevin (Kevin Geeyoung)
प्रकाशित: (2011)

Bigelow’s computer repair toolkit [electronic resource] /
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A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs.
द्वारा: Swain, M, और अन्य
प्रकाशित: (2012)

OPTIC: orthologous and paralogous transcripts in clades
द्वारा: Heger, A, और अन्य
प्रकाशित: (2009)

Variable strength of translational selection among 12 Drosophila species.
द्वारा: Heger, A, और अन्य
प्रकाशित: (2007)

OPTIC: Orthologous and paralogous transcripts in clades
द्वारा: Heger, A, और अन्य
प्रकाशित: (2008)

OPTIC: orthologous and paralogous transcripts in clades.
द्वारा: Heger, A, और अन्य
प्रकाशित: (2008)

The PROSPER toolkit
द्वारा: Dennis, L, और अन्य
प्रकाशित: (2003)

The PROSPER Toolkit
द्वारा: Dennis, L, और अन्य
प्रकाशित: (2000)

Partial Evaluation for Scientific Computing: The Supercomputer Toolkit Experience
द्वारा: Berlin, Andrew, और अन्य
प्रकाशित: (2004)

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The Supercomputer Toolkit: A General Framework for Special-purpose Computing
द्वारा: Abelson, Harold, और अन्य
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Accurate estimation of gene evolutionary rates using XRATE, with an application to transmembrane proteins.
द्वारा: Heger, A, और अन्य
प्रकाशित: (2009)

Defining the microbial transcriptional response to colitis through integrated host and microbiome profiling
द्वारा: Ilott, N, और अन्य
प्रकाशित: (2016)

Growing Greener: creating a new values-based environmental engagement toolkit for SME intermediaries
द्वारा: Hampton, S, और अन्य
प्रकाशित: (2019)

Reshaping the Landscape of the Genome: Toolkits for Precise DNA Methylation Manipulation and Beyond
द्वारा: Chenyou Zhu, और अन्य
प्रकाशित: (2023-12-01)

Genome and epigenome engineering CRISPR toolkit for in vivo modulation of cis-regulatory interactions and gene expression in the chicken embryo
द्वारा: Williams, R, और अन्य
प्रकाशित: (2018)

User Toolkits for Innovation
द्वारा: von Hippel, Eric A.
प्रकाशित: (2012)

The change management toolkit /
द्वारा: 248668 Carnall, Colin A.
प्रकाशित: (2003)

The gesture recognition toolkit
द्वारा: Gillian, Nicholas, और अन्य
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