Single-cell atlas of colonic CD8+ T cells in ulcerative colitis

Single-cell atlas of colonic CD8+ T cells in ulcerative colitis

Colonic antigen-experienced lymphocytes such as tissue-resident memory CD8+ T cells can respond rapidly to repeated antigen exposure. However, their cellular phenotypes and the mechanisms by which they drive immune regulation and inflammation remain unclear. Here we compiled an unbiased atlas of hum...

Disgrifiad llawn

Manylion Llyfryddiaeth
Prif Awduron:	Corridoni, D, Antanaviciute, A, Gupta, T, Fawkner-Corbett, D, Aulicino, A, Jagielowicz, M, Parikh, K, Repapi, E, Taylor, S, Ishikawa, D, Hatano, R, Yamada, T, Xin, W, Slawinski, H, Bowden, R, Napolitani, G, Brain, O, Morimoto, C, Koohy, H, Simmons, A
Fformat:	Journal article
Iaith:	English
Cyhoeddwyd:	Springer Nature 2020

Eitemau Tebyg

Spatiotemporal analysis of human intestinal development at single-cell resolution
gan: Fawkner-Corbett, D, et al.
Cyhoeddwyd: (2021)

Isolation of human fetal intestinal cells for single-cell RNA sequencing
gan: Fawkner-Corbett, DW, et al.
Cyhoeddwyd: (2021)

Dual RNA sequencing reveals dendritic cell reprogramming in response to typhoidal Salmonella invasion
gan: Aulicino, A, et al.
Cyhoeddwyd: (2022)

Colonic epithelial cell diversity in health and inflammatory bowel disease
gan: Parikh, K, et al.
Cyhoeddwyd: (2019)

Inflammatory bowel disease through the lens of single-cell RNA-seq technologies
gan: Corridoni, D, et al.
Cyhoeddwyd: (2020)

Microbiome, pattern recognition receptor function in health and inflammation
gan: Fawkner-Corbett, D, et al.
Cyhoeddwyd: (2017)

Structural remodeling of the human colonic mesenchyme in inflammatory bowel disease
gan: Kinchen, J, et al.
Cyhoeddwyd: (2018)

Predicting cross-reactivity and antigen specificity of T cell receptors
gan: Lee, CH, et al.
Cyhoeddwyd: (2020)

Predicting Cross-Reactivity and Antigen Specificity of T Cell Receptors
gan: Chloe H. Lee, et al.
Cyhoeddwyd: (2020-10-01)

IL-6 effector function of group 2 innate lymphoid cells (ILC2) is NOD2 dependent
gan: Hardman, CS, et al.
Cyhoeddwyd: (2021)

Potential CD8+ T cell cross-reactivity against SARS-CoV-2 conferred by other coronavirus strains
gan: Lee, CH, et al.
Cyhoeddwyd: (2020)

Evasion of MAIT cell recognition by the African Salmonella Typhimurium ST313 pathovar that causes invasive disease
gan: Preciado-Llanes, L, et al.
Cyhoeddwyd: (2020)

ICG-001 affects DRP1 activity and ER stress correlative with its anti-proliferative effect
gan: Zinecker, H, et al.
Cyhoeddwyd: (2017)

Unbiased molecular definition of epithelial barrier formation and defects driving inflammatory bowel disease
gan: Fawkner-Corbett, D
Cyhoeddwyd: (2021)

Ataxin-3 links NOD2 and TLR2 mediated innate immune sensing and metabolism in myeloid cells
gan: Chapman, T, et al.
Cyhoeddwyd: (2019)

To what extent does MHC binding translate to immunogenicity in humans?
gan: Chloe H. Lee, et al.
Cyhoeddwyd: (2021-12-01)

Innate immune receptors for cross-presentation: The expanding role of NLRs
gan: Corridoni, D, et al.
Cyhoeddwyd: (2017)

A robust deep learning workflow to predict CD8 + T-cell epitopes
gan: Chloe H. Lee, et al.
Cyhoeddwyd: (2023-09-01)

Potential CD8+ T Cell Cross-Reactivity Against SARS-CoV-2 Conferred by Other Coronavirus Strains
gan: Chloe H. Lee, et al.
Cyhoeddwyd: (2020-11-01)

Emerging mechanisms of innate immunity and their translational potential in inflammatory bowel disease.
gan: Corridoni, D, et al.
Cyhoeddwyd: (2018)

Invasive Salmonella exploits divergent immune evasion strategies in infected and bystander dendritic cell subsets
gan: Aulicino, A, et al.
Cyhoeddwyd: (2018)

Plasma nuclear magnetic resonance metabolomics discriminates between high and low endoscopic activity and predicts progression in a prospective cohort of patients with ulcerative colitis
gan: Probert, F, et al.
Cyhoeddwyd: (2018)

A comparison of clustering models for inference of T cell receptor antigen specificity
gan: Hudson, D, et al.
Cyhoeddwyd: (2023)

Enteric nervous system stem cells associated with thickened extrinsic fibers in short segment aganglionic Hirschsprung's disease gut are absent in the total colonic and intestinal variants of disease
gan: Bethell, G, et al.
Cyhoeddwyd: (2016)

R-spondin 3 promotes stem cell recovery and epithelial regeneration in the colon
gan: Harnack, C, et al.
Cyhoeddwyd: (2019)

Fly Cell Atlas: a single-cell transcriptomic atlas of the adult fruit fly
gan: Li, H, et al.
Cyhoeddwyd: (2021)

The Organoid Cell Atlas
gan: Bock, Christoph, et al.
Cyhoeddwyd: (2021)

The adult human testis transcriptional cell atlas
gan: Guo, J, et al.
Cyhoeddwyd: (2018)

A single-cell atlas of the human substantia nigra reveals cell-specific pathways associated with neurological disorders
gan: Agarwal, D, et al.
Cyhoeddwyd: (2020)

Invasive Salmonella exploits divergent immune evasion strategies in infected and bystander dendritic cell subsets
gan: Anna Aulicino, et al.
Cyhoeddwyd: (2018-11-01)

The Human Cell Atlas
gan: Teichmann, Sarah A, et al.
Cyhoeddwyd: (2018)

The Human Cell Atlas
gan: Aviv Regev, et al.
Cyhoeddwyd: (2017-12-01)

Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses
gan: Napolitani, G, et al.
Cyhoeddwyd: (2018)

Intestinal DC in migrational imprinting of immune cells.
gan: Stock, A, et al.
Cyhoeddwyd: (2013)

Intestinal DC in migrational imprinting of immune cells
gan: Stock, A, et al.
Cyhoeddwyd: (2013)

Ataxin-3 Links NOD2 and TLR2 Mediated Innate Immune Sensing and Metabolism in Myeloid Cells
gan: Thomas P. Chapman, et al.
Cyhoeddwyd: (2019-07-01)

Science Forum: The Human Cell Atlas.
gan: Regev, A, et al.
Cyhoeddwyd: (2017)

BMP pathway antagonism by Grem1 regulates epithelial cell fate in intestinal regeneration
gan: Koppens, MAJ, et al.
Cyhoeddwyd: (2021)

Single-Cell and Time-Resolved Profiling of Intracellular Salmonella Metabolism in Primary Human Cells
gan: Xu, J, et al.
Cyhoeddwyd: (2019)

Dissociation and inDrops microfluidic encapsulation of human gut tissues for single-cell atlasing studies
gan: Alan J. Simmons, et al.
Cyhoeddwyd: (2022-09-01)