Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree
Stochastic models that allow site substitutions, insertions, and deletions provide a useful framework for a statistical approach to DNA sequence evolution. Such a model, and recursions to calculate the probability of evolving two sequences, have been known for almost a decade. In this paper we show...
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| Format: | Journal article |
| Language: | English |
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2001
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| _version_ | 1826272979064979456 |
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| author | Steel, M Hein, J |
| author_facet | Steel, M Hein, J |
| author_sort | Steel, M |
| collection | OXFORD |
| description | Stochastic models that allow site substitutions, insertions, and deletions provide a useful framework for a statistical approach to DNA sequence evolution. Such a model, and recursions to calculate the probability of evolving two sequences, have been known for almost a decade. In this paper we show how the pairwise recursions can be generalised to a three-sequence tree, and more generally to an r-sequence star-shaped tree. © 2001 Elsevier Science Ltd. |
| first_indexed | 2024-03-06T22:21:07Z |
| format | Journal article |
| id | oxford-uuid:5518829e-b024-441b-8db1-17edbfd3f457 |
| institution | University of Oxford |
| language | English |
| last_indexed | 2024-03-06T22:21:07Z |
| publishDate | 2001 |
| record_format | dspace |
| spelling | oxford-uuid:5518829e-b024-441b-8db1-17edbfd3f4572022-03-26T16:41:50ZApplying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped treeJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:5518829e-b024-441b-8db1-17edbfd3f457EnglishSymplectic Elements at Oxford2001Steel, MHein, JStochastic models that allow site substitutions, insertions, and deletions provide a useful framework for a statistical approach to DNA sequence evolution. Such a model, and recursions to calculate the probability of evolving two sequences, have been known for almost a decade. In this paper we show how the pairwise recursions can be generalised to a three-sequence tree, and more generally to an r-sequence star-shaped tree. © 2001 Elsevier Science Ltd. |
| spellingShingle | Steel, M Hein, J Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree |
| title | Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree |
| title_full | Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree |
| title_fullStr | Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree |
| title_full_unstemmed | Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree |
| title_short | Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree |
| title_sort | applying the thorne kishino felsenstein model to sequence evolution on a star shaped tree |
| work_keys_str_mv | AT steelm applyingthethornekishinofelsensteinmodeltosequenceevolutiononastarshapedtree AT heinj applyingthethornekishinofelsensteinmodeltosequenceevolutiononastarshapedtree |