Processing and population genetic analysis of multigenic datasets with ProSeq3 software.

Processing and population genetic analysis of multigenic datasets with ProSeq3 software.

MOTIVATION: The current tendency in molecular population genetics is to use increasing numbers of genes in the analysis. Here I describe a program for handling and population genetic analysis of DNA polymorphism data collected from multiple genes. The program includes a sequence/alignment editor an...

Full description

Bibliographic Details
Main Author:	Filatov, D
Format:	Journal article
Language:	English
Published:	2009

Similar Items

ProSeq4: a user-friendly multiplatform program for preparation and analysis of large-scale DNA polymorphism datasets
by: Filatov, D
Published: (2024)

PROSEQ: A software for preparation and evolutionary analysis of DNA sequence data sets
by: Filatov, D
Published: (2002)

Processing single-cell RNA-seq datasets using SingCellaR
by: Wang, G, et al.
Published: (2022)

Multigenic and induced systemic resistance in plants /
by: 270760 Tuzun, Sadik, et al.
Published: (2006)

Monogenic, multigenic, and polygenic determinants of cancer risk
by: Banava, Helen.
Published: (2005)

Multigene metabolic engineering for the increase of photosynthetic efficiency
by: Moreno Garcia, B
Published: (2020)

RNA2HLA: HLA-based quality control of RNA-seq datasets
by: Chelysheva, I, et al.
Published: (2021)

Multigene Phylogeography of Bactrocera caudata (Insecta: Tephritidae): Distinct Genetic Lineages in Northern and Southern Hemispheres
by: Yong, Hoi Sen, et al.
Published: (2015)

Multigenic control of skin tumour development in mice - Discussion
by: Weiss, K, et al.
Published: (1996)

ANALYSIS OF THE GLIADIN MULTIGENE LOCI IN BREAD WHEAT USING NULLISOMATIC-TETRASOMIC LINES
by: Harberd, N, et al.
Published: (1985)

Functional significance of the STEVOR multigene family of plasmodium falciparum
by: Madnani, Kripa Gopal
Published: (2016)

A Calpain-like multigene family in trypanosoma brucei
by: Olego-Fernandez, S
Published: (2010)

RNA-Seq dataset generated from stimulation of cultured Tc2 cells
by: Hoyle, R
Published: (2021)

Multigene amplification and massively parallel sequencing for cancer mutation discovery.
by: Dahl, F, et al.
Published: (2007)

Rapid activation of distinct members of multigene families in Plasmodium spp
by: Omelianczyk, Radoslaw Igor, et al.
Published: (2021)

Rapid activation of distinct members of multigene families in Plasmodium spp
by: Omelianczyk, Radoslaw Igor, et al.
Published: (2020)

Improved haplotype inference by exploiting long-range linking and allelic imbalance in RNA-seq datasets
by: Berger, E, et al.
Published: (2021)

SEQ2SEQ++: a multitasking-based seq2seq model to generate meaningful and relevant answers
by: Palasundram, Kulothunkan, et al.
Published: (2021)

Genetic circuit characterization and debugging using RNA‐seq
by: Gorochowski, Thomas Edward, et al.
Published: (2018)

Improved haplotype inference by exploiting long-range linking and allelic imbalance in RNA-seq datasets
by: Berger, Emily, et al.
Published: (2022)

Combination of novel and public RNA-seq datasets to generate an mRNA expression atlas for the domestic chicken
by: Bush, S, et al.
Published: (2018)

Advancing Seq2seq with Joint Paraphrase Learning
by: Min, So Yeon, et al.
Published: (2022)

Fast processing RNA-Seq on multicore processor
by: Lee, Jia Bin, et al.
Published: (2021)

Construction And Evaluation Of Multigene Mutants Of Vibrio Cholerae O139 As Vaccine Candidates
by: Murugaiah, Chandrika
Published: (2011)

Multigene human artificial chromosome vector delivery with herpes simplex virus 1 amplicons
by: Chan, DYL, et al.
Published: (2020)

Characterization of the repertoire diversity of the Plasmodium falciparum stevor multigene family in laboratory and field isolates.
by: Blythe, J, et al.
Published: (2009)

Comparative analysis of gnathostome Otx gene expression patterns in the developing eye: implications for the functional evolution of the multigene family.
by: Plouhinec, J, et al.
Published: (2005)

A simple RNA analysis method shows var and rif multigene family expression patterns in Plasmodium falciparum.
by: Kyes, S, et al.
Published: (2000)

Massively parallel single-nucleus RNA-seq with DroNc-seq
by: Avraham-Davidi, Inbal, et al.
Published: (2018)

Characterization of the multigene family coding for HMW glutenin subunits in wheat using cDNA clones.
by: Thompson, R, et al.
Published: (1983)

RNA-seq analysis in plant–fungus interactions
by: Ling, Ho Chai, et al.
Published: (2017)

De novo ChIP-seq analysis
by: He, Xin, et al.
Published: (2015)

Automated, highly scalable RNA-seq analysis
by: Kirchner, Rory
Published: (2016)

Imputation and simulation of large genetic datasets
by: Shi, S
Published: (2022)

CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq
by: Hashimshony, Tamar, et al.
Published: (2016)

DUAL PROCESSES IN POPULATION-GENETICS
by: Donnelly, P
Published: (1986)

DNA copy-number measurement of genome replication dynamics by high-throughput sequencing: the sort-seq, sync-seq and MFA-seq family.
by: Batrakou, DG, et al.
Published: (2020)

Model-based Analysis of ChIP-Seq (MACS)
by: Zhang, Yong, et al.
Published: (2010)

Principal Component Analysis of Process Datasets with Missing Values
by: Severson, Kristen, et al.
Published: (2020)

Decoupling genetics, lineages, and microenvironment in IDH-mutant gliomas by single-cell RNA-seq
by: Venteicher, Andrew S., et al.
Published: (2018)