Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants.

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants.

Plant-microbe interactions in the rhizosphere have important roles in biogeochemical cycling, and maintenance of plant health and productivity, yet remain poorly understood. Using RNA-based metatranscriptomics, the global active microbiomes were analysed in soil and rhizospheres of wheat, oat, pea a...

Full description

Bibliographic Details
Main Authors:	Turner, T, Ramakrishnan, K, Walshaw, J, Heavens, D, Alston, M, Swarbreck, D, Osbourn, A, Grant, A, Poole, P
Format:	Journal article
Language:	English
Published:	2013

Similar Items

Metatranscriptomics and Amplicon Sequencing Reveal Mutualisms in Seagrass Microbiomes
by: Byron C. Crump, et al.
Published: (2018-03-01)

Comparative Metatranscriptomics of Wheat Rhizosphere Microbiomes in Disease Suppressive and Non-suppressive Soils for Rhizoctonia solani AG8
by: Helen L. Hayden, et al.
Published: (2018-05-01)

Metatranscriptomics of the Hu sheep rumen microbiome reveals novel cellulases
by: Bo He, et al.
Published: (2019-06-01)

Use of Metatranscriptomics in Microbiome Research
by: Stavros Bashiardes, et al.
Published: (2016-04-01)

Use of Metatranscriptomics in Microbiome Research
by: Stavros Bashiardes, et al.
Published: (2016-01-01)

Metatranscriptomics of the Human Oral Microbiome during Health and Disease
by: Peter Jorth, et al.
Published: (2014-05-01)

Integrated Analysis of Metatranscriptome and Amplicon Sequencing to Reveal Distinctive Rhizospheric Microorganisms of Salt-Tolerant Rice
by: Wenna Meng, et al.
Published: (2024-12-01)

Metatranscriptomes of activated sludge microbiomes from saline wastewater treatment plant
by: Asala Mahajna, et al.
Published: (2025-02-01)

Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous Genlisea species
by: Hieu X. Cao, et al.
Published: (2015-07-01)

Host-plant adaptation in xylophagous insect-microbiome systems: Contributionsof longicorns and gut symbionts revealed by parallel metatranscriptome
by: Si-Xun Ge, et al.
Published: (2023-05-01)

Direct Metatranscriptomic Survey of the Sunflower Microbiome and Virome
by: Ziyi Wang, et al.
Published: (2021-09-01)

Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis
by: Vanessa Aguiar-Pulido, et al.
Published: (2016-05-01)

Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
by: Vojtěch Tláskal, et al.
Published: (2021-08-01)

Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis
by: Vanessa Aguiar-Pulido, et al.
Published: (2016-01-01)

Respiratory immune status and microbiome in recovered COVID-19 patients revealed by metatranscriptomic analyses
by: Huan Meng, et al.
Published: (2022-11-01)

Functional dynamics of bacterial species in the mouse gut microbiome revealed by metagenomic and metatranscriptomic analyses.
by: Youn Wook Chung, et al.
Published: (2020-01-01)

Comparative Microbiome Study of Mummified Peach Fruits by Metagenomics and Metatranscriptomics
by: Yeonhwa Jo, et al.
Published: (2020-08-01)

The plant microbiome.
by: Turner, T, et al.
Published: (2013)

Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle
by: Fuyong Li, et al.
Published: (2019-01-01)

Linkages between plant rhizosphere and animal gut environments: Interaction effects of pesticides with their microbiomes
by: Balasubramanian Ramakrishnan, et al.
Published: (2021-10-01)

Revealing the active microbiome connected with the rhizosphere soil of maize plants in Ventersdorp, South Africa
by: Olubukola Babalola, et al.
Published: (2021-02-01)

Microbiome in Eosinophilic Esophagitis—Metagenomic, Metatranscriptomic, and Metabolomic Changes: A Systematic Review
by: Jordan D. Busing, et al.
Published: (2021-09-01)

Metatranscriptomic analysis revealed Prevotella as a potential biomarker of oropharyngeal microbiomes in SARS-CoV-2 infection
by: Sifen Lu, et al.
Published: (2023-06-01)

Rhizosphere microbiome regulation: Unlocking the potential for plant growth
by: Chenghua Luo, et al.
Published: (2025-01-01)

Influence of plant genotype and soil on the cotton rhizosphere microbiome
by: Chuanzhen Yang, et al.
Published: (2022-09-01)

Rhizosphere Microbiome: The Emerging Barrier in Plant-Pathogen Interactions
by: Jingtao Li, et al.
Published: (2021-10-01)

Rhizosphere microbiome: Functional compensatory assembly for plant fitness
by: Weibing Xun, et al.
Published: (2021-01-01)

Editorial: Rhizosphere interactions: root exudates and the rhizosphere microbiome
by: Linkun Wu, et al.
Published: (2023-09-01)

Stability and succession of the rhizosphere microbiota depends upon plant type and soil composition
by: Tkacz, A, et al.
Published: (2015)

Communication between Plants and Rhizosphere Microbiome: Exploring the Root Microbiome for Sustainable Agriculture
by: Ben Jesuorsemwen Enagbonma, et al.
Published: (2023-08-01)

Comparative Study of the Rhizosphere and Root Endosphere Microbiomes of Cholistan Desert Plants
by: Salma Mukhtar, et al.
Published: (2021-03-01)

Mechanisms Underlying the Rhizosphere-To-Rhizoplane Enrichment of <i>Cellvibrio</i> Unveiled by Genome-Centric Metagenomics and Metatranscriptomics
by: Yunzeng Zhang, et al.
Published: (2020-04-01)

Metatranscriptome Analysis Deciphers Multifunctional Genes and Enzymes Linked With the Degradation of Aromatic Compounds and Pesticides in the Wheat Rhizosphere
by: Dhananjaya P. Singh, et al.
Published: (2018-07-01)

The Rhizosphere Microbiome of Ginseng
by: Paul H. Goodwin
Published: (2022-06-01)

The microbiome and metatranscriptome of a panel from the Sarracenia mapping population reveal complex assembly and function involving host influence
by: Jiazhang Cai, et al.
Published: (2024-10-01)

Metagenomic and metatranscriptomic analyses reveal minor-yet-crucial roles of gut microbiome in deep-sea hydrothermal vent snail
by: Yi Yang, et al.
Published: (2022-01-01)

Metatranscriptomics Reveals the Diversity of the Tick Virome in Northwest China
by: Yunyi Kong, et al.
Published: (2022-10-01)

The rhizosphere revisited: root microbiomics
by: Peter A.H.M. Bakker, et al.
Published: (2013-05-01)

Antarctic Relic Microbial Mat Community Revealed by Metagenomics and Metatranscriptomics
by: Elena Zaikova, et al.
Published: (2019-01-01)

Engineering the Rhizosphere Microbiome with Plant Growth Promoting Bacteria for Modulation of the Plant Metabolome
by: Maria J. Ferreira, et al.
Published: (2024-08-01)