Automatic assignment of methyl resonances using experimental NMR data and graph theory

Automatic assignment of methyl resonances using experimental NMR data and graph theory

<p>Selective isotope labeling of methyl groups allows for atomic-resolution insight into the structures and dynamics of high molecular mass proteins by nuclear magnetic resonance (NMR) spectroscopy. Widespread application of the methodology has been limited due to the challenges and costs asso...

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Bibliografiske detaljer
Hovedforfatter:	Pritišanac, I
Andre forfattere:	Baldwin, A
Format:	Thesis
Sprog:	English
Udgivet:	2016

Lignende værker

Automatic assignment of methyl-NMR spectra of supra-molecular machines using graph theory
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Backbone-independent NMR resonance assignments of methyl probes in large proteins
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Automated Projection Spectroscopy (APSY) for the Assignment of NMR Resonances of Biological Macromolecules
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Assignment of protein NMR spectra using heteronuclear NMR: a tutorial
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Udgivet: (2015)

Assigning backbone NMR resonances for full length tau isoforms: efficient compromise between manual assignments and reduced dimensionality.
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Udgivet: (2012-01-01)

Robust automated backbone triple resonance NMR assignments of proteins using Bayesian-based simulated annealing
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Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra
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Udgivet: (2018-01-01)

Towards resolving the complex paramagnetic nuclear magnetic resonance (NMR) spectrum of small laccase: assignments of resonances to residue-specific nuclei
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Udgivet: (2021-01-01)

NMReDATA, a standard to report the NMR assignment and parameters of organic compounds
af: Pupier, M, et al.
Udgivet: (2018)

Complete Assignments of NMR Spectral Data of Three C19-Diterpenoid Alkaloids
af: YIN Tian-peng, et al.
Udgivet: (2019-09-01)

An algorithm based on the graph theory for solving the time-criterion assignement problem
af: R. Avram-Niţchi
Udgivet: (1984-08-01)

An algorithm based on the graph theory for solving the time-criterion assignement problem
af: R. Avram-Niţchi
Udgivet: (1984-08-01)

Robust, integrated computational control of NMR experiments to achieve optimal assignment by ADAPT-NMR.
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Udgivet: (2012-01-01)

Graph neural network based approach to automatically assigning common weakness enumeration identifiers for vulnerabilities
af: Peng Liu, et al.
Udgivet: (2023-11-01)

Backbone Assignment of the MALT1 Paracaspase by Solution NMR.
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Udgivet: (2016-01-01)

Two-dimensional 19F–13C correlation NMR for 19F resonance assignment of fluorinated proteins
af: Shcherbakov, Alexander A, et al.
Udgivet: (2021)

Efficient resonance assignment of proteins in MAS NMR by simultaneous intra- and inter-residue 3D correlation spectroscopy
af: Daviso, Eugenio, et al.
Udgivet: (2015)

Automatic assignment of EC numbers.
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Udgivet: (2010-01-01)

Flight Level Assignment Using Graph Coloring
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Udgivet: (2020-09-01)

Flight level assignment using graph coloring
af: Gimenez-Guzman, Jose Manuel, et al.
Udgivet: (2020)

1D and 2D NMR datasets, resonance assignments and coupling constant analysis of red beet fiber and pectin
af: Gary D. Strahan, et al.
Udgivet: (2023-02-01)

Strategies for RNA Resonance Assignment by 13C/15N- and 1H-Detected Solid-State NMR Spectroscopy
af: Philipp Innig Aguion, et al.
Udgivet: (2021-10-01)

NMR Assignment of Methyl Groups in Immobilized Proteins Using Multiple-Bond 13C Homonuclear Transfers, Proton Detection, and Very Fast MAS
af: Piotr Paluch, et al.
Udgivet: (2022-03-01)

Assignment of NMR spectral data of diastereomeric tetrahydrofuranyl acetals directly from their mixture by spectral simulation
af: Nešić Milan S., et al.
Udgivet: (2024-01-01)

POKY software tools encapsulating assignment strategies for solution and solid-state protein NMR data
af: Ira Manthey, et al.
Udgivet: (2022-01-01)

Assignments of NMR Spectral Data of a Novel Carbazole-Triazinoindole Based N-Acylhydrazone Derivative
af: LI Ying-jun, et al.
Udgivet: (2020-12-01)

Refining Kea++ automatic keyphrase assignment
af: Irfan, R, et al.
Udgivet: (2014)

Channel assignment on graphs of bounded treewidth.
af: McDiarmid, C, et al.
Udgivet: (2003)

An Attempt to Assign the NMR Spectra in 7-Methyl-and 7-Benzyl-substituted 7H-Purine 1-Oxides Using the ACD/Labs Software Package
af: StanisÃ…Â‚aw Ostrowski
Udgivet: (2003-08-01)

Generating experimental data for the generalized assignment problem
af: Romero-Morales, D, et al.
Udgivet: (2001)

Synthesis and 13C NMR chemical shift assignments of 2,2'-bipyridine-4,4'-dicarboxylates of bile acid methyl esters
af: Jari T. Tamminen, et al.
Udgivet: (2000-02-01)

Automatic Structural Synthesis of Planetary Geared Mechanisms ‎using Graph Theory
af: Hind A. Nafeh, et al.
Udgivet: (2023-04-01)

Theory of NMR parameters/
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Udgivet: (1983)

Evaluation of Multi-Objective Optimization Algorithms for NMR Chemical Shift Assignment
af: Emel Maden Yılmaz, et al.
Udgivet: (2021-06-01)

Chemical shift transfer: an effective strategy for protein NMR assignment with ARTINA
af: Henry Wetton, et al.
Udgivet: (2023-10-01)

Isolation, purification, and full NMR assignments of cyclopamine from <it>Veratrum californicum</it>
af: Gallien Thomas N, et al.
Udgivet: (2008-06-01)

NMR assignments of ring-opened indole alkaloids from leuconotis species /
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Automatic pharmacophore model generation using weighted substructure assignments
af: Jahn Andreas, et al.
Udgivet: (2010-05-01)

Using Machine Learning Methods for Automatic Bug Assignment to Developers
af: M. Yousefi, et al.
Udgivet: (2020-07-01)