DNA nanotubes and their interaction with membranes: insights through multiscale molecular dynamics simulations

DNA nanotubes and their interaction with membranes: insights through multiscale molecular dynamics simulations

<p>DNA origami offers the possibility of developing novel membrane-spanning pores with potential applications in therapeutics and in nanosensors. In this work multiscale molecular dynamics simulation approaches have been employed to understand the dynamics of a DNA nanotube, and of its interac...

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Bibliografiske detaljer
Hovedforfatter:	Maingi, V
Andre forfattere:	Sansom, M
Format:	Thesis
Udgivet:	2016

Lignende værker

Order and interactions in DNA arrays: Multiscale molecular dynamics simulation
af: Julija Zavadlav, et al.
Udgivet: (2017-07-01)

Membrane/Toxin Interaction Energetics via Serial Multiscale Molecular Dynamics Simulations
af: Wee, C, et al.
Udgivet: (2010)

Insight into the interactions of fullerenes with biological membranes through molecular dynamics simulations
af: Nililla Nisoh, et al.
Udgivet: (2024-12-01)

Multiscale molecular modeling and simulation of carbon nanotubes /
af: Yeak, Su Hoe, 1971-
Udgivet: (2007)

Multiscale molecular modeling and simulation of carbon nanotubes
af: Yeak, Su Hoe
Udgivet: (2010)

Multiscale molecular dynamics simulations of lipid interactions with P-glycoprotein in a complex membrane
af: Domicevica, L, et al.
Udgivet: (2017)

Multiscale molecular dynamics simulations of lipid interactions with P-glycoprotein in a complex membrane.
af: Domicevica, L, et al.
Udgivet: (2017)

Membrane Interactions of α-Synuclein revealed by multiscale molecular dynamics simulations, Markov state models, and NMR
af: Amos, S-BTA, et al.
Udgivet: (2021)

Stability and Dynamics of Membrane-Spanning DNA Nanopores
af: Maingi, V, et al.
Udgivet: (2017)

The Interaction Potential of an Open Nanotube and its Permeability: Molecular Dynamics Simulation
af: Bubenchikov Mikhail A, et al.
Udgivet: (2016-01-01)

Multiscale simulations of lipid interactions with integral membrane proteins: aquaporins
af: Stansfeld, P, et al.
Udgivet: (2011)

Interactions of perihperal membrane proteins with phosphatidylinositol lipids: insights from molecular dynamics simulations
af: Naughton, F
Udgivet: (2017)

Molecular dynamics simulations of water transport through carbon nanotubes
af: Wong, Zhi Hao.
Udgivet: (2009)

Molecular dynamics simulation of water transport through carbon nanotubes
af: Chen, Luwei.
Udgivet: (2009)

A multiscale simulation study of carbon nanotube interactions with designed amphiphilic peptide helices.
af: Wallace, E, et al.
Udgivet: (2010)

Multiscale modeling and simulation of nanotube-based torsional oscillators
af: Xiao Shaoping, et al.
Udgivet: (2006-01-01)

Interactions between Rhodamine Dyes and Model Membrane Systems—Insights from Molecular Dynamics Simulations
af: Nisa Magalhães, et al.
Udgivet: (2022-02-01)

Membrane-Interacting DNA Nanotubes Induce Cancer Cell Death
af: Samet Kocabey, et al.
Udgivet: (2021-08-01)

Differentiable Multiscale Molecular Simulations
af: Wang, Wujie
Udgivet: (2023)

Stability and dynamics of membrane-spanning DNA nanopores
af: Vishal Maingi, et al.
Udgivet: (2017-03-01)

Molecular Dynamics Simulation of Water Treatment Using Thermal Driving Force and Carbon Nanotube Membrane
af: Arash Rajabi-Vahid, et al.
Udgivet: (2024-03-01)

Torsional characteristics of single walled carbon nanotube with water interactions by using molecular dynamics simulation
af: Vijayaraghavan, V., et al.
Udgivet: (2014)

Gating-like motions and wall porosity in a DNA nanopore scaffold revealed by molecular simulations
af: Sansom, M, et al.
Udgivet: (2015)

Interactions of Two Amphipathic Cell-Penetrating Peptides with Complex Model Membranes: Insights from Molecular Dynamics Simulations
af: Helie, J, et al.
Udgivet: (2013)

Exploring Membrane Binding Targets of Disordered Human Tau Aggregates on Lipid Rafts Using Multiscale Molecular Dynamics Simulations
af: Kwan H. Cheng, et al.
Udgivet: (2022-11-01)

Multiscale Molecular Dynamics Simulation of Plasma Processing: Application to Plasma Sputtering
af: Pascal Brault
Udgivet: (2018-06-01)

‘Turning the tide’ on hyperglycemia in pregnancy: insights from multiscale dynamic simulation modeling
af: Louise Maple-Brown, et al.
Udgivet: (2020-08-01)

Towards molecular simulations of glycans, glycoproteins, and membrane-membrane interactions
af: Jefferys, V
Udgivet: (2021)

Insight on molecular interactions in shrinkage of Na-montmorillonite clay by molecular dynamics simulation
af: Wei-Qiang Feng, et al.
Udgivet: (2024-06-01)

Advanced Sampling Methods for Multiscale Simulation of Disordered Proteins and Dynamic Interactions
af: Xiping Gong, et al.
Udgivet: (2021-09-01)

Insights into Membrane Translocation of Protegrin Antimicrobial Peptides by Multistep Molecular Dynamics Simulations
af: Pin-Kuang Lai, et al.
Udgivet: (2018-06-01)

Modeling of annexin A2-Membrane interactions by molecular dynamics simulations.
af: Davit Hakobyan, et al.
Udgivet: (2017-01-01)

Abstract P-2: Multiscale Molecular Dynamics Simulations of the Skin Membranes as a Tool for the Interpretation of the Transmission Electron Microscopy Images
af: Marine E. Bozdaganyan
Udgivet: (2021-06-01)

Multiscale mechanics and molecular dynamics simulations of the durability of fiber-reinforced polymer composites
af: Kui Lin, et al.
Udgivet: (2023-08-01)

Exploring the Electronic and Mechanical Properties of TPDH Nanotube: Insights from Ab Initio and Classical Molecular Dynamics Simulations
af: Juan Gomez Quispe, et al.
Udgivet: (2024-12-01)

Nitrogen Adsorption on Double-Walled Carbon Nanotube at Different Temperatures: Mechanistic Insights from Molecular Dynamics Simulations
af: Utkir B. Uljaev, et al.
Udgivet: (2024-03-01)

Insight Into the Molecular Dynamic Simulation Studies of Reactive Oxygen Species in Native Skin Membrane
af: Dharmendra K. Yadav, et al.
Udgivet: (2018-06-01)

Insight from Molecular dynamic simulation of reactive oxygen species in oxidized skin membrane
af: Surendra Kumar, et al.
Udgivet: (2018-09-01)

Interaction of Chondroitin and Hyaluronan Glycosaminoglycans with Surfaces of Carboxylated Carbon Nanotubes Studied Using Molecular Dynamics Simulations
af: Tomasz Panczyk, et al.
Udgivet: (2023-01-01)

Molecular dynamics modeling and simulations of carbon nanotube-based gears
af: Che, Lokman Jaafar, et al.
Udgivet: (2015)