Whole genome sequencing for surveillance of tuberculosis drug resistance and determination of resistant level in China

Whole genome sequencing for surveillance of tuberculosis drug resistance and determination of resistant level in China

<strong>Objectives</strong> Phenotypic drug susceptibility testing for prediction of tuberculosis (TB) drug resistance is slow and unreliable, limiting individualized therapy and monitoring of national TB data. Our study evaluated whole-genome sequencing (WGS) for its predictive accuracy...

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí:	Liu, D, Huang, F, Zhang, G, He, W, Ou, X, He, P, Zhao, B, Zhu, B, Liu, F, Li, Z, Liu, C, Xia, H, Wang, S, Zhou, Y, Walker, TM, Liu, L, Crook, DW, Zhao, Y
Formáid:	Journal article
Teanga:	English
Foilsithe / Cruthaithe:	European Society of Clinical Microbiology and Infectious Diseases 2021

Míreanna comhchosúla

Whole genome sequencing for M/XDR tuberculosis surveillance and for resistance testing
de réir: Walker, T, et al.
Foilsithe / Cruthaithe: (2016)

The implementation of whole-genome sequencing for Mycobacterium tuberculosis in Vietnam
de réir: Huong, DT, et al.
Foilsithe / Cruthaithe: (2024)

Drug-Resistant Profiles and Genetic Diversity of Mycobacterium Tuberculosis Revealed by Whole-Genome Sequencing in Hinggan League of Inner Mongolia, China
de réir: Feng L, et al.
Foilsithe / Cruthaithe: (2024-07-01)

The use of whole-genome sequencing in cluster investigation of a multidrug-resistant tuberculosis outbreak
de réir: Lalor, MK, et al.
Foilsithe / Cruthaithe: (2018)

Surveillance of fluoroquinolones resistance in rifampicin-susceptible tuberculosis in eastern China with whole-genome sequencing-based approach
de réir: Yang Che, et al.
Foilsithe / Cruthaithe: (2024-07-01)

Lineage classification and antitubercular drug resistance surveillance of Mycobacterium tuberculosis by whole-genome sequencing in Southern India
de réir: Mahadev Rao, et al.
Foilsithe / Cruthaithe: (2023-10-01)

Elucidation of drug resistant mutations of Mycobacterium tuberculosis by whole genome sequencing from North India
de réir: Sethi, S, et al.
Foilsithe / Cruthaithe: (2019)

Clinical and public health utility of Mycobacterium tuberculosis whole genome sequencing
de réir: Kizny Gordon, A, et al.
Foilsithe / Cruthaithe: (2021)

Prediction of Staphylococcus aureus antimicrobial resistance by whole-genome sequencing
de réir: Gordon, N, et al.
Foilsithe / Cruthaithe: (2014)

Whole-genome sequencing for predicting clarithromycin resistance in Mycobacterium abscessus
de réir: Lipworth, S, et al.
Foilsithe / Cruthaithe: (2018)

Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis
de réir: Walker, T, et al.
Foilsithe / Cruthaithe: (2016)

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study.
de réir: Walker, T, et al.
Foilsithe / Cruthaithe: (2015)

Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples
de réir: Iqbal, Z, et al.
Foilsithe / Cruthaithe: (2017)

Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples
de réir: Votintseva, A, et al.
Foilsithe / Cruthaithe: (2017)

Whole genome sequencing of Mycobacterium tuberculosis
de réir: Cabibbe, A, et al.
Foilsithe / Cruthaithe: (2018)

Multi-platform whole genome sequencing for tuberculosis clinical and surveillance applications
de réir: Joseph Thorpe, et al.
Foilsithe / Cruthaithe: (2024-03-01)

Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis—response
de réir: Walker, T, et al.
Foilsithe / Cruthaithe: (2017)

The implementation of whole-genome sequencing for Mycobacterium tuberculosis in Vietnam
de réir: D.T. Huong, et al.
Foilsithe / Cruthaithe: (2024-07-01)

Sources of multidrug resistance in patients with previous isoniazid-resistant tuberculosis identified using whole genome sequencing: A longitudinal cohort study
de réir: Srinivasan, V, et al.
Foilsithe / Cruthaithe: (2020)

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study
de réir: Walker, T, et al.
Foilsithe / Cruthaithe: (2015)

Whole Genome Sequence-Based Analyses of Drug Resistance Characteristics, Genetic Diversity, and Transmission Dynamics of Drug-Resistant Mycobacterium tuberculosis in Urumqi City
de réir: Yang J, et al.
Foilsithe / Cruthaithe: (2024-03-01)

The catalogue of Mycobacterium tuberculosis mutations associated with drug resistance to 12 drugs in China from a nationwide survey: a genomic analysis
de réir: Pei, S, et al.
Foilsithe / Cruthaithe: (2024)

Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe
de réir: Hunt, M, et al.
Foilsithe / Cruthaithe: (2019)

Whole-genome sequencing as part of national and international surveillance programmes for antimicrobial resistance: a roadmap
de réir: Iruka N Okeke, et al.
Foilsithe / Cruthaithe: (2020-11-01)

Whole-genome sequencing reveals transmission pattern and drug resistance of Mycobacterium tuberculosis intra- or inter-hosts
de réir: Feng Ding, et al.
Foilsithe / Cruthaithe: (2025-01-01)

Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase
de réir: Ezewudo, M, et al.
Foilsithe / Cruthaithe: (2018)

Whole genome sequencing and resistance in Escherichia coli
de réir: Davies, T
Foilsithe / Cruthaithe: (2019)

Plasmid classification in an era of whole-genome sequencing: application in studies of antibiotic resistance epidemiology
de réir: Orlek, A, et al.
Foilsithe / Cruthaithe: (2017)

Drug Resistance of Mycobacterium tuberculosis Based on Whole-Genome Sequencing in the Yi Ethnic Group, Sichuan Province, China
de réir: Wenfeng Gao, et al.
Foilsithe / Cruthaithe: (2023-01-01)

Identification of novel resistance-associated mutations and discrimination within whole-genome sequences of fluoroquinolone-resistant Mycobacterium tuberculosis isolates
de réir: Yingzhi Chong, et al.
Foilsithe / Cruthaithe: (2024-06-01)

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues
de réir: Walker, T
Foilsithe / Cruthaithe: (2019)

Multidrug-resistant Escherichia coli soft tissue infection investigated with bacterial whole genome sequencing.
de réir: Buchanan, R, et al.
Foilsithe / Cruthaithe: (2014)

Whole-genome sequencing of streptomycin-resistant Mycobacterium tuberculosis strain SBH145 from Sabah, Malaysia
de réir: Zainal Arifin Mustapha, et al.
Foilsithe / Cruthaithe: (2022)

Genetic diversity and transmission pattern of multidrug-resistant tuberculosis based on whole-genome sequencing in Wuhan, China
de réir: Liqing Wei, et al.
Foilsithe / Cruthaithe: (2025-01-01)

A pragmatic pipeline for drug resistance and lineage identification in Mycobacterium tuberculosis using whole genome sequencing.
de réir: Linzy Elton, et al.
Foilsithe / Cruthaithe: (2025-01-01)

Whole genome sequencing based characterization of extensively drug-resistant Mycobacterium tuberculosis isolates from Pakistan.
de réir: Asho Ali, et al.
Foilsithe / Cruthaithe: (2015-01-01)

Clinical application of whole-genome sequencing in the management of extensively drug-resistant tuberculosis: a case report
de réir: Bugwesa Z. Katale, et al.
Foilsithe / Cruthaithe: (2024-08-01)

Whole genome sequencing of resistance and virulence genes in multi-drug resistant Pseudomonas aeruginosa
de réir: Reem S. Almaghrabi, et al.
Foilsithe / Cruthaithe: (2024-02-01)

Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data
de réir: Yang, Y, et al.
Foilsithe / Cruthaithe: (2017)

The role of whole-genome sequencing technology in the control and treatment of Mycobacterium tuberculosis infection
de réir: Walker, T
Foilsithe / Cruthaithe: (2015)