Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination

SARS-CoV-2 has gradually acquired amino acid substitutions in its S protein that reduce the potency of neutralizing antibodies, leading to decreased vaccine efficacy. Here, we attempted to obtain mutant viruses by passaging SARS-CoV-2 in the presence of plasma samples from convalescent patients or v...

ver descrição completa

Detalhes bibliográficos
Principais autores: Yamamoto, S, Yamayoshi, S, Ito, M, Sakai-Tagawa, Y, Nakachi, I, Baba, R, Kamimoto, S, Ogura, T, Hagiwara, S, Kato, H, Nakajima, H, Uwamino, Y, Yagi, K, Sugaya, N, Nagai, H, Saito, M, Adachi, E, Koga, M, Tsutsumi, T, Duong, C, Okuda, M, Murakami, J, Furusawa, Y, Ujie, M, Iwatsuki-Horimoto, K, Yotsuyanagi, H, Kawaoka, Y
Formato: Journal article
Idioma:English
Publicado em: Cell Press 2023
_version_ 1826312865775091712
author Yamamoto, S
Yamayoshi, S
Ito, M
Sakai-Tagawa, Y
Nakachi, I
Baba, R
Kamimoto, S
Ogura, T
Hagiwara, S
Kato, H
Nakajima, H
Uwamino, Y
Yagi, K
Sugaya, N
Nagai, H
Saito, M
Adachi, E
Koga, M
Tsutsumi, T
Duong, C
Okuda, M
Murakami, J
Furusawa, Y
Ujie, M
Iwatsuki-Horimoto, K
Yotsuyanagi, H
Kawaoka, Y
author_facet Yamamoto, S
Yamayoshi, S
Ito, M
Sakai-Tagawa, Y
Nakachi, I
Baba, R
Kamimoto, S
Ogura, T
Hagiwara, S
Kato, H
Nakajima, H
Uwamino, Y
Yagi, K
Sugaya, N
Nagai, H
Saito, M
Adachi, E
Koga, M
Tsutsumi, T
Duong, C
Okuda, M
Murakami, J
Furusawa, Y
Ujie, M
Iwatsuki-Horimoto, K
Yotsuyanagi, H
Kawaoka, Y
author_sort Yamamoto, S
collection OXFORD
description SARS-CoV-2 has gradually acquired amino acid substitutions in its S protein that reduce the potency of neutralizing antibodies, leading to decreased vaccine efficacy. Here, we attempted to obtain mutant viruses by passaging SARS-CoV-2 in the presence of plasma samples from convalescent patients or vaccinees to determine which amino acid substitutions affect the antigenicity of SARS-CoV-2. Several amino acid substitutions in the S2 region, as well as the N-terminal domain (NTD) and receptor-binding domain (RBD), affected the neutralization potency of plasma samples collected from vaccinees, indicating that amino acid substitutions in the S2 region as well as those in the NTD and RBD affect neutralization by vaccine-induced antibodies. Furthermore, the neutralizing potency of vaccinee plasma samples against mutant viruses we obtained or circulating viruses differed among individuals. These findings suggest that genetic backgrounds of vaccinees influence the recognition of neutralizing epitopes.
first_indexed 2024-09-25T04:01:50Z
format Journal article
id oxford-uuid:776b5ce9-e6ac-43b0-b014-f67a3f68a11e
institution University of Oxford
language English
last_indexed 2024-09-25T04:01:50Z
publishDate 2023
publisher Cell Press
record_format dspace
spelling oxford-uuid:776b5ce9-e6ac-43b0-b014-f67a3f68a11e2024-04-29T16:07:32ZDifferences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccinationJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:776b5ce9-e6ac-43b0-b014-f67a3f68a11eEnglishSymplectic ElementsCell Press2023Yamamoto, SYamayoshi, SIto, MSakai-Tagawa, YNakachi, IBaba, RKamimoto, SOgura, THagiwara, SKato, HNakajima, HUwamino, YYagi, KSugaya, NNagai, HSaito, MAdachi, EKoga, MTsutsumi, TDuong, COkuda, MMurakami, JFurusawa, YUjie, MIwatsuki-Horimoto, KYotsuyanagi, HKawaoka, YSARS-CoV-2 has gradually acquired amino acid substitutions in its S protein that reduce the potency of neutralizing antibodies, leading to decreased vaccine efficacy. Here, we attempted to obtain mutant viruses by passaging SARS-CoV-2 in the presence of plasma samples from convalescent patients or vaccinees to determine which amino acid substitutions affect the antigenicity of SARS-CoV-2. Several amino acid substitutions in the S2 region, as well as the N-terminal domain (NTD) and receptor-binding domain (RBD), affected the neutralization potency of plasma samples collected from vaccinees, indicating that amino acid substitutions in the S2 region as well as those in the NTD and RBD affect neutralization by vaccine-induced antibodies. Furthermore, the neutralizing potency of vaccinee plasma samples against mutant viruses we obtained or circulating viruses differed among individuals. These findings suggest that genetic backgrounds of vaccinees influence the recognition of neutralizing epitopes.
spellingShingle Yamamoto, S
Yamayoshi, S
Ito, M
Sakai-Tagawa, Y
Nakachi, I
Baba, R
Kamimoto, S
Ogura, T
Hagiwara, S
Kato, H
Nakajima, H
Uwamino, Y
Yagi, K
Sugaya, N
Nagai, H
Saito, M
Adachi, E
Koga, M
Tsutsumi, T
Duong, C
Okuda, M
Murakami, J
Furusawa, Y
Ujie, M
Iwatsuki-Horimoto, K
Yotsuyanagi, H
Kawaoka, Y
Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
title Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
title_full Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
title_fullStr Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
title_full_unstemmed Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
title_short Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
title_sort differences among epitopes recognized by neutralizing antibodies induced by sars cov 2 infection or covid 19 vaccination
work_keys_str_mv AT yamamotos differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT yamayoshis differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT itom differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT sakaitagaway differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT nakachii differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT babar differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT kamimotos differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT ogurat differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT hagiwaras differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT katoh differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT nakajimah differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT uwaminoy differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT yagik differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT sugayan differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT nagaih differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT saitom differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT adachie differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT kogam differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT tsutsumit differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT duongc differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT okudam differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT murakamij differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT furusaway differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT ujiem differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT iwatsukihorimotok differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT yotsuyanagih differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination
AT kawaokay differencesamongepitopesrecognizedbyneutralizingantibodiesinducedbysarscov2infectionorcovid19vaccination