Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant

Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant

Infants (under 1-year-old) are at most risk of life threatening respiratory syncytial virus (RSV) disease. RSV epidemiological data alone has been insufficient in defining who acquires infection from whom (WAIFW) within households. We investigated RSV genomic variation within and between infected in...

Bibliografske podrobnosti
Main Authors:	Agoti, CN, Phan, MVT, Munywoki, PK, Githinji, G, Medley, GF, Cane, PA, Kellam, P, Cotten, M, Nokes, DJ
Format:	Journal article
Jezik:	English
Izdano:	Springer Nature 2019

Podobne knjige/članki

Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis
od: Agoti, CN, et al.
Izdano: (2017)

Model-based estimates of transmission of respiratory syncytial virus within households
od: Ivy K. Kombe, et al.
Izdano: (2019-06-01)

Integrating epidemiological and genetic data with different sampling intensities into a dynamic model of respiratory syncytial virus transmission
od: Ivy K. Kombe, et al.
Izdano: (2021-01-01)

Quantification and determinants of the amount of respiratory syncytial virus (RSV) shed using real time PCR data from a longitudinal household study [version 2; referees: 2 approved, 2 approved with reservations]
od: Miriam Wathuo, et al.
Izdano: (2017-03-01)

Quantification and determinants of the amount of respiratory syncytial virus (RSV) shed using real time PCR data from a longitudinal household study [version 1; referees: 2 approved, 1 approved with reservations]
od: Miriam Wathuo, et al.
Izdano: (2016-12-01)

Evaluating the performance of tools used to call minority variants from whole genome short-read data.
od: Said Mohammed, K, et al.
Izdano: (2018)

Incidence and severity of respiratory syncytial virus pneumonia in rural Kenyan children identified through hospital surveillance.
od: Nokes, D, et al.
Izdano: (2009)

Respiratory syncytial virus epidemiology in a birth cohort from Kilifi district, Kenya: infection during the first year of life
od: Nokes, J, et al.
Izdano: (2004)

Respiratory syncytial virus epidemiology in a birth cohort from Kilifi district, Kenya: infection during the first year of life.
od: Nokes, D, et al.
Izdano: (2004)

Respiratory syncytial virus infection and disease in infants and young children observed from birth in Kilifi district, Kenya
od: Nokes, D, et al.
Izdano: (2008)

Respiratory syncytial virus infection and disease in infants and young children observed from birth in Kilifi District, Kenya.
od: Nokes, D, et al.
Izdano: (2008)

Understanding the transmission dynamics of respiratory syncytial virus using multiple time series and nested models
od: White, LJ, et al.
Izdano: (2006)

Identification of missed viruses by metagenomic sequencing of clinical respiratory samples from Kenya
od: My V. T. Phan, et al.
Izdano: (2022-01-01)

Rapid Spread and Diversification of Respiratory Syncytial Virus Genotype ON1, Kenya
od: Charles N. Agoti, et al.
Izdano: (2014-06-01)

Duration of shedding of respiratory syncytial virus in a community study of Kenyan children.
od: Okiro, E, et al.
Izdano: (2010)

Reducing respiratory syncytial virus (RSV) hospitalization in a lower-income country by vaccinating mothers-to-be and their households
od: Samuel PC Brand, et al.
Izdano: (2020-03-01)

Defining the vaccination window for respiratory syncytial virus (RSV) using age-seroprevalence data for children in Kilifi, Kenya
od: Nyiro, JU, et al.
Izdano: (2017)

The transmission dynamics of groups A and B human respiratory syncytial virus (hRSV) in England and Wales and Finland: seasonality and cross-protection.
od: White, L, et al.
Izdano: (2005)

The transmission dynamics of groups A and B human respiratory syncytial virus (hRSV) in England & Wales and Finland: seasonality and cross-protection
od: White, L, et al.
Izdano: (2005)

Duration of shedding of respiratory syncytial virus in a community study of Kenyan children
od: Ngama Mwanajuma, et al.
Izdano: (2010-01-01)

Evaluating the performance of tools used to call minority variants from whole genome short-read data [version 2; referees: 2 approved]
od: Khadija Said Mohammed, et al.
Izdano: (2018-09-01)

Infection patterns of endemic human coronaviruses in rural households in coastal Kenya [version 1; peer review: 1 approved, 2 approved with reservations]
od: Ivy K. Kombe, et al.
Izdano: (2021-02-01)

Modeling household dynamics on Respiratory Syncytial Virus (RSV)
od: Mahikul, W, et al.
Izdano: (2019)

Vaccine Induced Herd Immunity for Control of Respiratory Syncytial Virus Disease in a Low-Income Country Setting.
od: Timothy M Kinyanjui, et al.
Izdano: (2015-01-01)

Modeling household dynamics on Respiratory Syncytial Virus (RSV).
od: Wiriya Mahikul, et al.
Izdano: (2019-01-01)

Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010–2015
od: James R. Otieno, et al.
Izdano: (2017-02-01)

EVOLUTION AND TRANSMISSION OF HUMAN RESPIRATORY SYNCYTIAL VIRUS GROUP A (HRSVA) ACROSS KENYA FROM 2007 - 2010
od: J. Wangui, et al.
Izdano: (2022-03-01)

Epidemiological and evolutionary dynamics of influenza B virus in coastal Kenya as revealed by genomic analysis of strains sampled over a single season
od: Nyasimi, FM, et al.
Izdano: (2020)

Spatio-temporal distribution of rhinovirus types in Kenya: a retrospective analysis, 2014
od: Morobe, JM, et al.
Izdano: (2024)

The cost of care for children hospitalized with respiratory syncytial virus (RSV) associated lower respiratory infection in Kenya
od: Joyce U. Nyiro, et al.
Izdano: (2024-09-01)

Understanding the transmission dynamics of respiratory syncytial virus using multiple time series and nested models.
od: White, L, et al.
Izdano: (2007)

Efficiency of transplacental transfer of respiratory syncytial virus (RSV) specific antibodies among pregnant women in Kenya
od: Nyiro, JU, et al.
Izdano: (2022)

Implications of gestational age at antenatal care attendance on the successful implementation of a maternal respiratory syncytial virus (RSV) vaccine program in coastal Kenya
od: Nyiro, JU, et al.
Izdano: (2020)

Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
od: James Wambua, et al.
Izdano: (2022-01-01)

Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya.
od: James Wambua, et al.
Izdano: (2022-01-01)

Seasonality of respiratory syncytial virus infection.
od: Waris, M, et al.
Izdano: (2006)

RESPIRATORY SYNCYTIAL VIRUS INFECTION IN INFANTS
od: K. V. YEVDOKIMOV, et al.
Izdano: (2017-05-01)

Agreement between ELISA and plaque reduction neutralisation assay in Detection of respiratory syncytial virus specific antibodies in a birth Cohort from Kilifi, coastal Kenya
od: Nyiro, J, et al.
Izdano: (2019)

Absence of association between cord specific antibody levels and severe respiratory syncytial virus (RSV) disease in early infants: A case control study from coastal Kenya
od: Nyiro, J, et al.
Izdano: (2016)

Impact of viral upper respiratory tract infection on the concentration of nasopharyngeal pneumococcal carriage among Kenyan children
od: Morpeth, SC, et al.
Izdano: (2018)