Modelling the distribution of chickens, ducks, and geese in China

Global concerns over the emergence of zoonotic pandemics emphasize the need for high-resolution population distribution mapping and spatial modelling. Ongoing efforts to model disease risk in China have been hindered by a lack of available species level distribution maps for poultry. The goal of thi...

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Main Authors: Prosser, D, Wu, J, Ellis, E, Gale, F, Van Boeckel, T, Wint, W, Robinson, T, Xiao, X, Gilbert, M
Format: Journal article
Language:English
Published: 2011
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author Prosser, D
Wu, J
Ellis, E
Gale, F
Van Boeckel, T
Wint, W
Robinson, T
Xiao, X
Gilbert, M
author_facet Prosser, D
Wu, J
Ellis, E
Gale, F
Van Boeckel, T
Wint, W
Robinson, T
Xiao, X
Gilbert, M
author_sort Prosser, D
collection OXFORD
description Global concerns over the emergence of zoonotic pandemics emphasize the need for high-resolution population distribution mapping and spatial modelling. Ongoing efforts to model disease risk in China have been hindered by a lack of available species level distribution maps for poultry. The goal of this study was to develop 1. km resolution population density models for China's chickens, ducks, and geese. We used an information theoretic approach to predict poultry densities based on statistical relationships between poultry census data and high-resolution agro-ecological predictor variables. Model predictions were validated by comparing goodness of fit measures (root mean square error and correlation coefficient) for observed and predicted values for 1/4 of the sample data which were not used for model training. Final output included mean and coefficient of variation maps for each species. We tested the quality of models produced using three predictor datasets and 4 regional stratification methods. For predictor variables, a combination of traditional predictors for livestock mapping and land use predictors produced the best goodness of fit scores. Comparison of regional stratifications indicated that for chickens and ducks, a stratification based on livestock production systems produced the best results; for geese, an agro-ecological stratification produced best results. However, for all species, each method of regional stratification produced significantly better goodness of fit scores than the global model. Here we provide descriptive methods, analytical comparisons, and model output for China's first high resolution, species level poultry distribution maps. Output will be made available to the scientific and public community for use in a wide range of applications from epidemiological studies to livestock policy and management initiatives. © 2011.
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spelling oxford-uuid:7a83bc74-b626-46a8-8d8b-b397687952542022-03-26T20:44:41ZModelling the distribution of chickens, ducks, and geese in ChinaJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:7a83bc74-b626-46a8-8d8b-b39768795254EnglishSymplectic Elements at Oxford2011Prosser, DWu, JEllis, EGale, FVan Boeckel, TWint, WRobinson, TXiao, XGilbert, MGlobal concerns over the emergence of zoonotic pandemics emphasize the need for high-resolution population distribution mapping and spatial modelling. Ongoing efforts to model disease risk in China have been hindered by a lack of available species level distribution maps for poultry. The goal of this study was to develop 1. km resolution population density models for China's chickens, ducks, and geese. We used an information theoretic approach to predict poultry densities based on statistical relationships between poultry census data and high-resolution agro-ecological predictor variables. Model predictions were validated by comparing goodness of fit measures (root mean square error and correlation coefficient) for observed and predicted values for 1/4 of the sample data which were not used for model training. Final output included mean and coefficient of variation maps for each species. We tested the quality of models produced using three predictor datasets and 4 regional stratification methods. For predictor variables, a combination of traditional predictors for livestock mapping and land use predictors produced the best goodness of fit scores. Comparison of regional stratifications indicated that for chickens and ducks, a stratification based on livestock production systems produced the best results; for geese, an agro-ecological stratification produced best results. However, for all species, each method of regional stratification produced significantly better goodness of fit scores than the global model. Here we provide descriptive methods, analytical comparisons, and model output for China's first high resolution, species level poultry distribution maps. Output will be made available to the scientific and public community for use in a wide range of applications from epidemiological studies to livestock policy and management initiatives. © 2011.
spellingShingle Prosser, D
Wu, J
Ellis, E
Gale, F
Van Boeckel, T
Wint, W
Robinson, T
Xiao, X
Gilbert, M
Modelling the distribution of chickens, ducks, and geese in China
title Modelling the distribution of chickens, ducks, and geese in China
title_full Modelling the distribution of chickens, ducks, and geese in China
title_fullStr Modelling the distribution of chickens, ducks, and geese in China
title_full_unstemmed Modelling the distribution of chickens, ducks, and geese in China
title_short Modelling the distribution of chickens, ducks, and geese in China
title_sort modelling the distribution of chickens ducks and geese in china
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