Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data.

Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data.

OBJECTIVES: Whole-genome sequencing potentially represents a single, rapid and cost-effective approach to defining resistance mechanisms and predicting phenotype, and strain type, for both clinical and epidemiological purposes. This retrospective study aimed to determine the efficacy of whole genome...

書目詳細資料
Main Authors:	Stoesser, N, Batty, E, Eyre, D, Morgan, M, Wyllie, D, Del Ojo Elias, C, Johnson, JR, Walker, A, Peto, T, Crook, D
格式:	Journal article
語言:	English
出版:	Oxford University Press 2013

相似書籍

Applications of whole genome sequencing to understanding the mechanisms, evolution and transmission of antibiotic resistance in Escherichia coli and Klebsiella pneumonia
由: Stoesser, N, et al.
出版: (2014)

Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli
由: Stoesser, N, et al.
出版: (2017)

Antimicrobial resistance genes and clonal success in Escherichia coli isolates causing bloodstream infection
由: Lipworth, S, et al.
出版: (2021)

Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli
由: N. Stoesser, et al.
出版: (2017-07-01)

Exploring uncatalogued genetic variation in antimicrobial resistance gene families in Escherichia coli, an observational analysis
由: Lipworth, S, et al.
出版: (2024)

Increasing incidence of Escherichia coli bacteraemia is driven by an increase in antibiotic-resistant isolates: electronic database study in Oxfordshire 1999-2011.
由: Schlackow, I, et al.
出版: (2012)

Colistin resistance gene mcr-1 and pHNSHP45 plasmid in human isolates of Escherichia coli and Klebsiella pneumoniae
由: Stoesser, N, et al.
出版: (2016)

Genomic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients
由: Constantinides, B, et al.
出版: (2020)

Ceftazidime-avibactam susceptibility against Escherichia coli and Klebsiella pneumoniae
由: Arun Sachu, et al.
出版: (2025-02-01)

Ten years of population-level genomic Escherichia coli and Klebsiella pneumoniae serotype surveillance informs vaccine development for invasive infections
由: Lipworth, SIW, et al.
出版: (2021)

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia
由: Van Aartsen, J, et al.
出版: (2017)

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia
由: Van Aartsen, J, et al.
出版: (2019)

Antibiotic susceptibility pattern of carbapenem resistant Escherichia coli and Klebsiella pneumoniae, 2019
由: Ibrahim Mohammed Hussaini, et al.
出版: (2024-12-01)

Ten year longitudinal molecular epidemiology study of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire, UK
由: Lipworth, SIW, et al.
出版: (2021)

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia
由: J. J. van Aartsen, et al.
出版: (2019-03-01)

Multidrug-resistant Escherichia coli soft tissue infection investigated with bacterial whole genome sequencing.
由: Buchanan, R, et al.
出版: (2014)

Antimicrobial resistance trends in clinical Escherichia coli and Klebsiella pneumoniae in Ethiopia
由: Abera A. Kitaba, et al.
出版: (2024-03-01)

Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing.
由: Mathers, A, et al.
出版: (2015)

Risk factors for Klebsiella pneumoniae carbapenemase (KPC) gene acquisition and clinical outcomes across multiple bacterial species
由: Mathers, A, et al.
出版: (2020)

Complete Genome Sequence of KPC-Producing Klebsiella pneumoniae Strain CAV1193.
由: Sheppard, A, et al.
出版: (2016)

AmpC β-lactamases detected in Southeast Asian Escherichia coli and Klebsiella pneumoniae
由: Roberts, T, et al.
出版: (2024)

Chromosomal integration of the Klebsiella pneumoniae carbapenemase gene (blaKPC) in Klebsiella species: Elusive but not rare
由: Mathers, A, et al.
出版: (2016)

ESBL‐production in Escherichia coli and Klebsiella pneumoniae isolates from Nigeria
由: Frederik B. Hertz, et al.
出版: (2019-09-01)

ChloS-HRM, a novel assay to identify chloramphenicol-susceptible Escherichia coli and Klebsiella pneumoniae in Malawi.
由: Williams, C, et al.
出版: (2019)

Global forecast of antimicrobial resistance in invasive isolates of Escherichia coli and Klebsiella pneumoniae
由: Gerardo Alvarez-Uria, et al.
出版: (2018-03-01)

Different Features of Escherichia coli and Klebsiella pneumoniae in Children and Adults
由: Vajihe Sheikhalizadeh, et al.
出版: (2018-02-01)

Ten-year longitudinal molecular epidemiology study of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire, UK
由: Samuel Lipworth, et al.
出版: (2021-09-01)

Influence of human urine to antimicrobial susceptibility of clinical isolates of Klebsiella pneumoniae and Escherichia coli producing β-lactamase of different types
由: Ž. Žagar, et al.
出版: (2007-02-01)

Update of incidence and antimicrobial susceptibility trends of Escherichia coli and Klebsiella pneumoniae isolates from Chinese intra-abdominal infection patients
由: Hui Zhang, et al.
出版: (2017-12-01)

Trends over time in Escherichia coli bloodstream infections, urinary tract infections, and antibiotic susceptibilities in Oxfordshire, UK, 1998–2016: a study of electronic health records
由: Vihta, K, et al.
出版: (2018)

Colistin resistance in Escherichia coli and Klebsiella pneumoniae in humans and backyard animals in Ecuador
由: Carlos Bastidas-Caldes, et al.
出版: (2023-04-01)

Cobalt complexes modulate plasmid conjugation in Escherichia coli and Klebsiella pneumoniae
由: Ilyas Alav, et al.
出版: (2024-04-01)

Phenotypic and molecular detection of carbapenemase producing Escherichia coli and Klebsiella pneumoniae
由: Ibrahim Hussaini, et al.
出版: (2023-02-01)

Relationship between Antimicrobial Consumption and the Incidence of Antimicrobial Resistance in Escherichia coli and Klebsiella pneumoniae Isolates
由: Noyal Mariya Joseph, et al.
出版: (2015-02-01)

Phenotypic Expression of Type 1 Klebsiella pneumoniae Fimbriae in Escherichia coli HB101
由: Ehab D. Selman, et al.
出版: (2011-06-01)

Glutathione-S-transferase FosA6 of klebsiella pneumoniae origin conferring fosfomycin resistance in ESBL-producing Escherichia coli
由: Guo, Q, et al.
出版: (2016)

Whole-genome sequencing demonstrates that fidaxomicin is superior to vancomycin for preventing reinfection and relapse of infection with Clostridium difficile
由: Eyre, D, et al.
出版: (2013)

Comparison of multilocus variable-number tandem-repeat analysis and whole-genome sequencing for investigation of Clostridium difficile transmission.
由: Eyre, D, et al.
出版: (2013)

Ribosome phenotypes for rapid classification of antibiotic-susceptible and resistant strains of Escherichia coli
由: Farrar, A, et al.
出版: (2025)

Covert dissemination of carbapenemase-producing Klebsiella pneumoniae (KPC) in a successfully controlled outbreak: long and short-read whole-genome sequencing demonstrate multiple genetic modes of transmission
由: Martin, J, et al.
出版: (2017)