An observational report of universal GeneXpert testing of inpatients with diagnosed or presumptive TB in the Philippines

<p><strong>BACKGROUND:</strong> The Philippines is a high TB and multidrug-resistant TB burden country. Although the scale-up of GeneXpert testing is occurring, the benefits of universal Xpert-Mycobacterium tuberculosis/ rifampicin (MTB/RIF) testing in inpatients have not been docu...

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Main Authors: Thi, AM, Lee, N, Parris, V, Marin, FP, Roy, L, Calapis, RW, Ariyoshi, K, Parry, CM, Cox, SE
格式: Journal article
语言:English
出版: Oxford University Press 2020
实物特征
总结:<p><strong>BACKGROUND:</strong> The Philippines is a high TB and multidrug-resistant TB burden country. Although the scale-up of GeneXpert testing is occurring, the benefits of universal Xpert-Mycobacterium tuberculosis/ rifampicin (MTB/RIF) testing in inpatients have not been documented.</p> <p><strong>METHODS:</strong> Routine GeneXpert testing irrespective of priority criteria for testing was conducted within a prospective cohort of all adults with known or presumptive TB admitted to a tertiary infectious diseases hospital in Manila. Study-specific TB diagnosis was decided upon bacteriological results, chest x-ray assessment, if already on anti-TB treatment (ATT) at admission and a cough duration of &#x2265;2 wk.</p> <p><strong>RESULTS:</strong> Of submitted sputum samples, 87.1% (277/318) had valid acid-fast bacilli (AFB) microscopy and Xpert&#xAE; MTB/RIF results. Xpert&#xAE; MTB/RIF was positive in 97.7% (n = 87/89) of AFB-positive patients and 25.5% (n = 48/188) of AFB-negative patients. Bacteriological confirmation in smear negative cases not on ATT prior to admission was 25.2% (34/135). Rifampicin resistance was detected in 26/135 Xpert positive cases (19.3%), including nine who might not otherwise have been detected, representing a 53% increase in yield.</p> <p><strong>CONCLUSION:</strong> Universal GeneXpert testing in this setting enhanced the yield of bacterial confirmation, revealing a high incidence of rifampicin resistance and suggesting a need for further investigations in Xpert-negative/smear-positive patients who may not have mycobacterial TB.</p>