Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads.

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads.

High-volume sequencing of DNA and RNA is now within reach of any research laboratory and is quickly becoming established as a key research tool. In many workflows, each of the short sequences ("reads") resulting from a sequencing run are first "mapped" (aligned) to a reference se...

Descripció completa

Dades bibliogràfiques
Autors principals:	Lunter, G, Goodson, M
Format:	Journal article
Idioma:	English
Publicat:	2011

Ítems similars

POLITIČKO KOMUNICIRANJE U DNEVNOJ ŠTAMPI SRBIJE
per: Zoran Jevtović, et al.
Publicat: (2012-06-01)

Isabella Becherucci, "Imprimatur: Si stampi Manzoni"
per: Giovanni Albertocchi
Publicat: (2020-10-01)

Slika Jugoslavije u istočnonemačkoj štampi 1957. godine
per: Natalija Dimić
Publicat: (2015-08-01)

Fast and sensitive mapping of nanopore sequencing reads with GraphMap
per: Ivan Sović, et al.
Publicat: (2016-04-01)

The effect of strand bias in Illumina short-read sequencing data
per: Guo Yan, et al.
Publicat: (2012-11-01)

HTQC: a fast quality control toolkit for Illumina sequencing data
per: Yang Xi, et al.
Publicat: (2013-01-01)

Joining Illumina paired-end reads for classifying phylogenetic marker sequences
per: Tsunglin Liu, et al.
Publicat: (2020-03-01)

PERCEPCIJA DRUGOSTI KAO POLITIČKOG NEPRIJATELJA – AMTISEMITIZAM U HRVATSKOJ ŠTAMPI PRVE POLOVINE 20. VEKA
per: Darko Gavrilović, et al.
Publicat: (2015-03-01)

Illumina reads correction: evaluation and improvements
per: Maciej Długosz, et al.
Publicat: (2024-01-01)

Statistical issues in the analysis of Illumina data
per: Tavaré Simon, et al.
Publicat: (2008-02-01)

The impact of RNA secondary structure on read start locations on the Illumina sequencing platform.
per: Adam Price, et al.
Publicat: (2017-01-01)

Rapid genotyping of targeted viral samples using Illumina short-read sequencing data.
per: Alex Váradi, et al.
Publicat: (2022-01-01)

Comparison of the Equine Reference Sequence with Its Sanger Source Data and New Illumina Reads.
per: Jovan Rebolledo-Mendez, et al.
Publicat: (2015-01-01)

QuorUM: An Error Corrector for Illumina Reads.
per: Guillaume Marçais, et al.
Publicat: (2015-01-01)

Mapping and Analysis of Illumina Reads for Transcriptome of Medicago Truncatula During the Early Organogenesis of the Nodule
per: Alexandre Boscari, et al.
Publicat: (2013-11-01)

Plant Sequence Capture Optimised for Illumina Sequencing
per: Axel Himmelbach, et al.
Publicat: (2014-07-01)

kngMap: Sensitive and Fast Mapping Algorithm for Noisy Long Reads Based on the K-Mer Neighborhood Graph
per: Ze-Gang Wei, et al.
Publicat: (2022-05-01)

PANDAseq: paired-end assembler for illumina sequences
per: Masella Andre P, et al.
Publicat: (2012-02-01)

RNA-Seq analysis and gene discovery of Andrias davidianus using Illumina short read sequencing.
per: Fenggang Li, et al.
Publicat: (2015-01-01)

Josip Broz Tito u ''Politici'' i ''Borbi'' februara 1969: o Kosovu i Metohiji, međunarodnim odnosima i štampi
per: Slobodan Selinić
Publicat: (2015-08-01)

Illumina short-read sequencing data, de novo assembly and annotations of the Drosophila nasuta nasuta genome
per: Stafny DSouza, et al.
Publicat: (2021-02-01)

Unveiling the transcriptomic complexity of Miscanthus sinensis using a combination of PacBio long read- and Illumina short read sequencing platforms
per: Yongli Wang, et al.
Publicat: (2021-09-01)

An extensive evaluation of read trimming effects on Illumina NGS data analysis.
per: Cristian Del Fabbro, et al.
Publicat: (2013-01-01)

Microbiome profiling by illumina sequencing of combinatorial sequence-tagged PCR products.
per: Gregory B Gloor, et al.
Publicat: (2010-10-01)

Raw pacific biosciences and illumina sequencing reads and assembled genome data for the cattle ticks Rhipicephalus microplus and Rhipicephalus annulatus
per: Felix D. Guerrero, et al.
Publicat: (2021-04-01)

Addressing challenges in the production and analysis of illumina sequencing data
per: Kelso Janet, et al.
Publicat: (2011-07-01)

Illumina short-read and MinION long-read whole genome sequencing to characterise the molecular epidemiology of an NDM-1-Serratia marcescens outbreak in Romania
per: Phan, H, et al.
Publicat: (2017)

ConDeTri--a content dependent read trimmer for Illumina data.
per: Linnéa Smeds, et al.
Publicat: (2011-01-01)

A glance at quality score: implication for de novo transcriptome reconstruction of Illumina reads
per: Stanley Kimbung Mbandi, et al.
Publicat: (2014-02-01)

Comparison of Burrows-Wheeler Transform-Based Mapping Algorithms Used in High-Throughput Whole-Genome Sequencing: Application to Illumina Data for Livestock Genomes1
per: Brittney N. Keel, et al.
Publicat: (2018-02-01)

SECAPR—a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments
per: Tobias Andermann, et al.
Publicat: (2018-07-01)

Quality Control and Low-Level Statistical Analysis of Illumina BeadArray
per: Mark J. Dunning, et al.
Publicat: (2006-03-01)

A genotype calling algorithm for the Illumina BeadArray platform.
per: Teo, Y, et al.
Publicat: (2007)

A genotype calling algorithm for the Illumina BeadArray platform.
per: Teo, Y, et al.
Publicat: (2007)

Evaluation of the MGISEQ-2000 Sequencing Platform for Illumina Target Capture Sequencing Libraries
per: Jidong Lang, et al.
Publicat: (2021-10-01)

Detecting mixtures of different tuberculosis lineages using Illumina sequencing
per: Wyllie, D
Publicat: (2018)

Lane-by-lane sequencing using Illumina's Genome Analyzer II
per: Michael T. Gravina, et al.
Publicat: (2013-05-01)

Assessing Illumina technology for the high-throughput sequencing of bacteriophage genomes
per: Branko Rihtman, et al.
Publicat: (2016-06-01)

Transcriptome sequencing of sesame (Sesamum indicum) using Illumina Platform
per: P SUPRIYA, et al.
Publicat: (2023-03-01)

Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing
per: Laurentijn Tilleman, et al.
Publicat: (2022-10-01)