Genome sequence of the human malaria parasite Plasmodium falciparum.

The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes...

Full description

Bibliographic Details
Main Authors: Gardner, M, Hall, N, Fung, E, White, O, Berriman, M, Hyman, R, Carlton, J, Pain, A, Nelson, K, Bowman, S, Paulsen, I, James, K, Eisen, J, Rutherford, K, Salzberg, S, Craig, A, Kyes, S, Chan, MS, Nene, V, Shallom, S, Suh, B, Peterson, J, Angiuoli, S, Pertea, M, Allen, J
Format: Journal article
Language:English
Published: 2002
_version_ 1797080428629196800
author Gardner, M
Hall, N
Fung, E
White, O
Berriman, M
Hyman, R
Carlton, J
Pain, A
Nelson, K
Bowman, S
Paulsen, I
James, K
Eisen, J
Rutherford, K
Salzberg, S
Craig, A
Kyes, S
Chan, MS
Nene, V
Shallom, S
Suh, B
Peterson, J
Angiuoli, S
Pertea, M
Allen, J
author_facet Gardner, M
Hall, N
Fung, E
White, O
Berriman, M
Hyman, R
Carlton, J
Pain, A
Nelson, K
Bowman, S
Paulsen, I
James, K
Eisen, J
Rutherford, K
Salzberg, S
Craig, A
Kyes, S
Chan, MS
Nene, V
Shallom, S
Suh, B
Peterson, J
Angiuoli, S
Pertea, M
Allen, J
author_sort Gardner, M
collection OXFORD
description The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes about 5,300 genes, and is the most (A + T)-rich genome sequenced to date. Genes involved in antigenic variation are concentrated in the subtelomeric regions of the chromosomes. Compared to the genomes of free-living eukaryotic microbes, the genome of this intracellular parasite encodes fewer enzymes and transporters, but a large proportion of genes are devoted to immune evasion and host-parasite interactions. Many nuclear-encoded proteins are targeted to the apicoplast, an organelle involved in fatty-acid and isoprenoid metabolism. The genome sequence provides the foundation for future studies of this organism, and is being exploited in the search for new drugs and vaccines to fight malaria.
first_indexed 2024-03-07T00:59:54Z
format Journal article
id oxford-uuid:895ac0ef-c24a-457c-aebb-3d58bf593332
institution University of Oxford
language English
last_indexed 2024-03-07T00:59:54Z
publishDate 2002
record_format dspace
spelling oxford-uuid:895ac0ef-c24a-457c-aebb-3d58bf5933322022-03-26T22:24:01ZGenome sequence of the human malaria parasite Plasmodium falciparum.Journal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:895ac0ef-c24a-457c-aebb-3d58bf593332EnglishSymplectic Elements at Oxford2002Gardner, MHall, NFung, EWhite, OBerriman, MHyman, RCarlton, JPain, ANelson, KBowman, SPaulsen, IJames, KEisen, JRutherford, KSalzberg, SCraig, AKyes, SChan, MSNene, VShallom, SSuh, BPeterson, JAngiuoli, SPertea, MAllen, JThe parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes about 5,300 genes, and is the most (A + T)-rich genome sequenced to date. Genes involved in antigenic variation are concentrated in the subtelomeric regions of the chromosomes. Compared to the genomes of free-living eukaryotic microbes, the genome of this intracellular parasite encodes fewer enzymes and transporters, but a large proportion of genes are devoted to immune evasion and host-parasite interactions. Many nuclear-encoded proteins are targeted to the apicoplast, an organelle involved in fatty-acid and isoprenoid metabolism. The genome sequence provides the foundation for future studies of this organism, and is being exploited in the search for new drugs and vaccines to fight malaria.
spellingShingle Gardner, M
Hall, N
Fung, E
White, O
Berriman, M
Hyman, R
Carlton, J
Pain, A
Nelson, K
Bowman, S
Paulsen, I
James, K
Eisen, J
Rutherford, K
Salzberg, S
Craig, A
Kyes, S
Chan, MS
Nene, V
Shallom, S
Suh, B
Peterson, J
Angiuoli, S
Pertea, M
Allen, J
Genome sequence of the human malaria parasite Plasmodium falciparum.
title Genome sequence of the human malaria parasite Plasmodium falciparum.
title_full Genome sequence of the human malaria parasite Plasmodium falciparum.
title_fullStr Genome sequence of the human malaria parasite Plasmodium falciparum.
title_full_unstemmed Genome sequence of the human malaria parasite Plasmodium falciparum.
title_short Genome sequence of the human malaria parasite Plasmodium falciparum.
title_sort genome sequence of the human malaria parasite plasmodium falciparum
work_keys_str_mv AT gardnerm genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT halln genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT funge genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT whiteo genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT berrimanm genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT hymanr genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT carltonj genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT paina genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT nelsonk genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT bowmans genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT paulseni genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT jamesk genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT eisenj genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT rutherfordk genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT salzbergs genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT craiga genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT kyess genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT chanms genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT nenev genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT shalloms genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT suhb genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT petersonj genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT angiuolis genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT perteam genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum
AT allenj genomesequenceofthehumanmalariaparasiteplasmodiumfalciparum