Bayesian inference of ancestral recombination graphs

We present a novel algorithm, implemented in the software ARGinfer, for probabilistic inference of the Ancestral Recombination Graph under the Coalescent with Recombination. Our Markov Chain Monte Carlo algorithm takes advantage of the Succinct Tree Sequence data structure that has allowed great adv...

Full description

Bibliographic Details
Main Authors: Kelleher, JT, Mahmoudi, A, Koskela, J, Chan, Y-B, Balding, D
Format: Journal article
Language:English
Published: Public Library of Science 2022