Real sequencing datasets for evaluating bacterial SNP calling pipelines
This archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". Collectively, this represents an ‘all-in-one’ archive of data to facilitate both the replication and expansion of this st...
| Main Author: | |
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| Format: | Dataset |
| Published: |
University of Oxford
2019
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| _version_ | 1826284756405321728 |
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| author | Bush, S |
| author2 | Bush, S |
| author_facet | Bush, S Bush, S |
| author_sort | Bush, S |
| collection | OXFORD |
| description | This archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". Collectively, this represents an ‘all-in-one’ archive of data to facilitate both the replication and expansion of this study using real sequencing data. It comprises 18 sets of paired-end reads and assemblies (sourced from the REHAB project), the associated indexed reference genomes, SNP call truth sets, VCFs, a suite of Perl scripts, and operating notes. |
| first_indexed | 2024-03-07T01:18:37Z |
| format | Dataset |
| id | oxford-uuid:8f902497-955e-4b84-9b85-693ee0e4433e |
| institution | University of Oxford |
| last_indexed | 2024-03-07T01:18:37Z |
| publishDate | 2019 |
| publisher | University of Oxford |
| record_format | dspace |
| spelling | oxford-uuid:8f902497-955e-4b84-9b85-693ee0e4433e2022-03-26T23:05:18ZReal sequencing datasets for evaluating bacterial SNP calling pipelinesDatasethttp://purl.org/coar/resource_type/c_ddb1uuid:8f902497-955e-4b84-9b85-693ee0e4433eORA DepositUniversity of Oxford2019Bush, SBush, SThis archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". Collectively, this represents an ‘all-in-one’ archive of data to facilitate both the replication and expansion of this study using real sequencing data. It comprises 18 sets of paired-end reads and assemblies (sourced from the REHAB project), the associated indexed reference genomes, SNP call truth sets, VCFs, a suite of Perl scripts, and operating notes. |
| spellingShingle | Bush, S Real sequencing datasets for evaluating bacterial SNP calling pipelines |
| title | Real sequencing datasets for evaluating bacterial SNP calling pipelines |
| title_full | Real sequencing datasets for evaluating bacterial SNP calling pipelines |
| title_fullStr | Real sequencing datasets for evaluating bacterial SNP calling pipelines |
| title_full_unstemmed | Real sequencing datasets for evaluating bacterial SNP calling pipelines |
| title_short | Real sequencing datasets for evaluating bacterial SNP calling pipelines |
| title_sort | real sequencing datasets for evaluating bacterial snp calling pipelines |
| work_keys_str_mv | AT bushs realsequencingdatasetsforevaluatingbacterialsnpcallingpipelines |