ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads
Antimicrobial resistance (AMR) is one of the major threats to human and animal health worldwide, yet few high-throughput tools exist to analyse and predict the resistance of a bacterial isolate from sequencing data. Here we present a new tool, ARIBA, that identifies AMR-associated genes and single n...
Những tác giả chính: | Hunt, M, Mather, AE, Sánchez-Busó, L, Page, AJ, Parkhill, J, Keane, JA, Harris, SR |
---|---|
Định dạng: | Journal article |
Ngôn ngữ: | English |
Được phát hành: |
Microbiology Society
2017
|
Những quyển sách tương tự
-
Rapid multi-locus sequence typing direct from uncorrected long reads using Krocus
Bằng: Andrew J. Page, et al.
Được phát hành: (2018-07-01) -
Using genomics to understand antimicrobial resistance and transmission in Neisseria gonorrhoeae
Bằng: Sanchez-Buso, L, et al.
Được phát hành: (2019) -
ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads
Bằng: Hunt, M, et al.
Được phát hành: (2022) -
ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads
Bằng: Hunt, M, et al.
Được phát hành: (2022) -
Identification of highly variable sequence fragments in unmapped reads for rapid bacterial genotyping
Bằng: Marketa Nykrynova, et al.
Được phát hành: (2022-12-01)