Model validation and robust stability analysis of the bacterial heat shock response using SOSTOOLS

Model validation and robust stability analysis of the bacterial heat shock response using SOSTOOLS

The complexity inherent in gene regulatory network models, as well as their nonlinear nature make them difficult to analyze or validate/invalidate using conventional tools. Combining ideas from robust control theory, real algebraic geometry, optimization and semidefinite programming, SOSTOOLS provid...

Disgrifiad llawn

Manylion Llyfryddiaeth
Prif Awduron:	El-Samad, H, Prajna, S, Papachristodoulou, A, Khammash, M, Doyle, J, IEEE
Fformat:	Conference item
Cyhoeddwyd:	2003

Eitemau Tebyg

Introducing SOSTOOLS: A general purpose sum of squares programming solver
gan: Prajna, S, et al.
Cyhoeddwyd: (2002)

SOSTOOLS and its control applications
gan: Prajna, S, et al.
Cyhoeddwyd: (2005)

SOSTOOLS: Control applications and new developments
gan: Prajna, S, et al.
Cyhoeddwyd: (2004)

New developments in sum of squares optimization and SOSTOOLS
gan: Prajna, S, et al.
Cyhoeddwyd: (2004)

SOSTOOLS Version 3.00 Sum of Squares Optimization Toolbox for MATLAB
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2013)

Module-based analysis of robustness tradeoffs in the heat shock response system.
gan: Hiroyuki Kurata, et al.
Cyhoeddwyd: (2006-07-01)

Robust stabilization of nonlinear time delay systems using convex optimization
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2005)

On the construction of Lyapunov functions using the sum of squares decomposition
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2002)

Advanced methods and algorithms for biological networks analysis
gan: El-Samad, H, et al.
Cyhoeddwyd: (2006)

Tutorial on sum of squares techniques for systems analysis
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2005)

Robust stability and performance analysis of a longitudinal aircraft model using sum of squares techniques
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2005)

Robust Stability Analysis of Nonlinear Hybrid Systems.
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2009)

Stochastic reachability analysis in complex biological networks
gan: El-Samad, H, et al.
Cyhoeddwyd: (2006)

Algorithms for discriminating between biochemical reaction network models: Towards systematic experimental design
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2007)

Global Stability Analysis of a TCP/AQM protocol for arbitrary networks with delay
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2004)

Generalised Absolute Stability and Sum of Squares
gan: Hancock, E, et al.
Cyhoeddwyd: (2011)

Analysis of nonlinear delay differential equation models of TCP/AQM protocols using sums of squares
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2004)

Stability analysis of linear systems with time-varying delays: Delay uncertainty and quenching
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2007)

Stability of congestion control schemes with delay sensitive traffic
gan: Li, Y, et al.
Cyhoeddwyd: (2008)

Uncertainty Modeling and Robust Stability Analysis of a Synchrotron Electron Beam Stabilisation Control System
gan: Gayadeen, S, et al.
Cyhoeddwyd: (2012)

Analysis of aircraft pitch axis stability augmentation system using sum of squares optimization
gan: Krishnaswamy, K, et al.
Cyhoeddwyd: (2005)

Analysis of aircraft pitch axis stability augmentation system using sum of squares optimization
gan: Krishnaswamy, K, et al.
Cyhoeddwyd: (2005)

Layering in networks: The case of biochemical systems
gan: Prescott, T, et al.
Cyhoeddwyd: (2013)

Positivity of kernel functions for systems with communication delay
gan: Peet, M, et al.
Cyhoeddwyd: (2007)

A Network Decomposition Approach for Efficient Sum of Squares Programming Based Analysis
gan: Anderson, J, et al.
Cyhoeddwyd: (2010)

On the analysis of systems described by classes of partial differential equations
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2006)

Determining interconnections in chemical reaction networks
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2007)

Synchonization in oscillator networks with heterogeneous delays, switching topologies and nonlinear dynamics
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2006)

A Real-time Control Framework for Smart Power Networks with Star Topology
gan: Zhang, X, et al.
Cyhoeddwyd: (2013)

Synchronization in oscillator networks: Switching topologies and non-homogeneous delays
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2005)

Robust, low-bandwidth, multi-vehicle mapping
gan: Reece, S, et al.
Cyhoeddwyd: (2005)

Robust Transcriptional Response to Heat Shock Impacting Diverse Cellular Processes despite Lack of Heat Shock Factor in Microsporidia
gan: Nora K. McNamara-Bordewick, et al.
Cyhoeddwyd: (2019-06-01)

Bacterial Heat Shock Protein Activity
gan: Farajollah Maleki, et al.
Cyhoeddwyd: (2016-03-01)

Constructing Lyapunov-Krasovskii functionals for linear time delay systems
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2005)

Controlled hybrid system safety verification: Advanced life support system testbed
gan: Glavaski, S, et al.
Cyhoeddwyd: (2005)

Robust contour tracking in echocardiographic sequences
gan: Jacob, G, et al.
Cyhoeddwyd: (1998)

The autorepressor: A case study of the importance of model selection
gan: Harris, AWK, et al.
Cyhoeddwyd: (2018)

Analysis of non-polynomial systems using the sum of squares decomposition
gan: Papachristodoulou, A, et al.
Cyhoeddwyd: (2005)

Robust MPC for linear systems with bounded multiplicative uncertainty
gan: Evans, M, et al.
Cyhoeddwyd: (2012)

An Active Set Solver for Min-Max Robust Control
gan: Buerger, J, et al.
Cyhoeddwyd: (2013)