Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea

Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea

Mostra altre versioni (1)

Cell sorting coupled with single-cell genomics is a powerful tool to circumvent cultivation of microorganisms and reveal microbial ‘dark matter’. Single-cell Raman spectra (SCRSs) are label-free biochemical ‘fingerprints’ of individual cells, which can link the sorted cells to their phenotypic infor...

Descrizione completa

Dettagli Bibliografici
Autori principali:	Song, Y, Kaster, A, Vollmers, J, Davison, P, Frentrup, M, Preston, G, Thompson, I, Murrell, J, Yin, H, Hunter, C, Huang, W
Natura:	Journal article
Pubblicazione:	Wiley 2016

Documenti analoghi

Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea.
di: Song, Y, et al.
Pubblicazione: (2016)

Raman-activated cell sorting and metagenomic sequencing revealing carbon-fixing bacteria in the ocean
di: Jing, X, et al.
Pubblicazione: (2018)

Raman activated cell sorting
di: Song, Y, et al.
Pubblicazione: (2016)

Raman‐activated sorting of antibiotic‐resistant bacteria in human gut microbiota
di: Wang, Y, et al.
Pubblicazione: (2020)

Targeted Cell Sorting Combined With Single Cell Genomics Captures Low Abundant Microbial Dark Matter With Higher Sensitivity Than Metagenomics
di: Hang T. Dam, et al.
Pubblicazione: (2020-07-01)

Raman-Activated, Interactive Sorting of Isotope-Labeled Bacteria
di: Sepehr Razi, et al.
Pubblicazione: (2024-07-01)

Raman-Deuterium Isotope Probing for in-situ identification of antimicrobial resistant bacteria in Thames River
di: Song, Y, et al.
Pubblicazione: (2017)

Raman image-activated cell sorting
di: Nao Nitta, et al.
Pubblicazione: (2020-07-01)

Diversity of Carotenoid Pigmented Marine Photosynthetic Bacteria in the Dumai Sea Waters
di: Mardhiah Batubara Ummi, et al.
Pubblicazione: (2024-01-01)

Raman Spectroscopy of Carotenoid Compounds for Clinical Applications—A Review
di: Joy Udensi, et al.
Pubblicazione: (2022-12-01)

Quantitative Raman Analysis of Carotenoid Protein Complexes in Aqueous Solution
di: Joy Udensi, et al.
Pubblicazione: (2022-07-01)

First shotgun metagenomics study of Juan de Fuca deep-sea sediments reveals distinct microbial communities above, within, between, and below sulfate methane transition zones
di: Felix Metze, et al.
Pubblicazione: (2023-11-01)

Raman cell sorting for single-cell research
di: Xusheng Tang, et al.
Pubblicazione: (2024-05-01)

Revealing CO2-fixing SAR11 bacteria in the ocean by Raman-based single-cell metabolic profiling and genomics
di: Jing, X, et al.
Pubblicazione: (2022)

Comparison of Miniaturized Raman Spectrometers for Discrimination of Carotenoids of Halophilic Microorganisms
di: Jan Jehlička, et al.
Pubblicazione: (2019-05-01)

Validity and reliability of Raman spectroscopy for carotenoid assessment in cattle skin
di: Megha Mehta, et al.
Pubblicazione: (2021-09-01)

Effects of spirulina carotenoid on carotenoid deposition and immunity in sex-reversed red tilapia
di: Phromkunthong, W., et al.
Pubblicazione: (2007-09-01)

Flourishing deep-sea AAP bacteria detected by flow cytometric sorting and molecular analysis.
di: Dajun Qiu, et al.
Pubblicazione: (2019-01-01)

Nondestructive assessment of maturity in cantaloupe using Raman spectroscopy with carotenoids as biomarkers
di: Ganga K. Sah, et al.
Pubblicazione: (2024-06-01)

Resonant Raman Spectroscopy of Carotenoids in Aging of Extra Virgin Olive Oil
di: Edward Curran Eggertson, et al.
Pubblicazione: (2023-09-01)

Comparing and Evaluating Metagenome Assembly Tools from a Microbiologist's Perspective - Not Only Size Matters!
di: John Vollmers, et al.
Pubblicazione: (2017-01-01)

High-throughput single-cell sorting by stimulated Raman-activated cell ejection
di: Zhang, J, et al.
Pubblicazione: (2023)

Raman-based sorting of microbial cells to link functions to their genes
di: Kang Soo Lee, et al.
Pubblicazione: (2020-02-01)

Classification of deep-sea cold seep bacteria by transformer combined with Raman spectroscopy
di: Bo Liu, et al.
Pubblicazione: (2023-02-01)

Isolation and molecular identification of carotenoid-producing bacteria
di: Razieh sadat Solouki Nezhad, et al.
Pubblicazione: (2019-05-01)

Raman Spectroscopy Detects Changes in Carotenoids on the Surface of Watermelon Fruits During Maturation
di: Tushar Dhanani, et al.
Pubblicazione: (2022-05-01)

Identification of Carotenoids in Halimeda macroloba Reef Associated Bacteria
di: Wiwik Astuti, et al.
Pubblicazione: (2016-12-01)

Nature, source and function of pigments in tardigrades: in vivo raman imaging of carotenoids in Echiniscus blumi.
di: Alois Bonifacio, et al.
Pubblicazione: (2012-01-01)

Oleaginous Red Yeasts: Concomitant Producers of Triacylglycerides and Carotenoids
di: Irene Fakankun, et al.
Pubblicazione: (2023-04-01)

Carotenoid Production by <i>Dunaliella salina</i> under Red Light
di: Yanan Xu, et al.
Pubblicazione: (2019-05-01)

Ultrasound-mediated DNA transfer for bacteria
di: Song, Y, et al.
Pubblicazione: (2007)

Ultrasound-mediated DNA transfer for bacteria.
di: Song, Y, et al.
Pubblicazione: (2007)

Printing Microbial Dark Matter: Using Single Cell Dispensing and Genomics to Investigate the Patescibacteria/Candidate Phyla Radiation
di: Sandra Wiegand, et al.
Pubblicazione: (2021-06-01)

Carotenoid productivity in human intestinal bacteria Eubacterium limosum and Leuconostoc mesenteroides with functional analysis of their carotenoid biosynthesis genes
di: Wataru Matsumoto, et al.
Pubblicazione: (2024-06-01)

Specific carotenoid pigments in the diet and a bit of oxidative stress in the recipe for producing red carotenoid-based signals
di: Esther García-de Blas, et al.
Pubblicazione: (2016-09-01)

Xanthophylls from the Sea: Algae as Source of Bioactive Carotenoids
di: Antia G. Pereira, et al.
Pubblicazione: (2021-03-01)

Carotenoids in fish. XXVII. Pleuronectidae from the Baltic Sea
di: B. Czeczuga
Pubblicazione: (1980-06-01)

Dark excited states of carotenoid in light harvesting complex probing with femtosecond stimulated Raman spectroscopy
di: Sakai S., et al.
Pubblicazione: (2013-03-01)

Genes and Pathway Reactions Related to Carotenoid Biosynthesis in Purple Bacteria
di: Gerhard Sandmann
Pubblicazione: (2023-10-01)

Evidence for hybrid breakdown in production of red carotenoids in the marine invertebrate Tigriopus californicus
di: Matthew J. Powers, et al.
Pubblicazione: (2021-01-01)