Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets

Myelofibrosis is a severe myeloproliferative neoplasm characterized by increased numbers of abnormal bone marrow megakaryocytes that induce fibrosis, destroying the hematopoietic microenvironment. To determine the cellular and molecular basis for aberrant megakaryopoiesis in myelofibrosis, we perfor...

Full description

Bibliographic Details
Main Authors: Psaila, B, Wang, G, Rodriguez-Meira, A, Li, R, Heuston, EF, Murphy, L, Yee, D, Hitchcock, IS, Sousos, N, O'Sullivan, J, Anderson, S, Senis, YA, Weinberg, OK, Calicchio, ML, NIH Intramural Sequencing Center, Iskander, D, Royston, D, Milojkovic, D, Roberts, I, Bodine, DM, Thongjuea, S, Mead, AJ
Format: Journal article
Language:English
Published: Elsevier 2020
_version_ 1826285793258242048
author Psaila, B
Wang, G
Rodriguez-Meira, A
Li, R
Heuston, EF
Murphy, L
Yee, D
Hitchcock, IS
Sousos, N
O'Sullivan, J
Anderson, S
Senis, YA
Weinberg, OK
Calicchio, ML
NIH Intramural Sequencing Center
Iskander, D
Royston, D
Milojkovic, D
Roberts, I
Bodine, DM
Thongjuea, S
Mead, AJ
author_facet Psaila, B
Wang, G
Rodriguez-Meira, A
Li, R
Heuston, EF
Murphy, L
Yee, D
Hitchcock, IS
Sousos, N
O'Sullivan, J
Anderson, S
Senis, YA
Weinberg, OK
Calicchio, ML
NIH Intramural Sequencing Center
Iskander, D
Royston, D
Milojkovic, D
Roberts, I
Bodine, DM
Thongjuea, S
Mead, AJ
author_sort Psaila, B
collection OXFORD
description Myelofibrosis is a severe myeloproliferative neoplasm characterized by increased numbers of abnormal bone marrow megakaryocytes that induce fibrosis, destroying the hematopoietic microenvironment. To determine the cellular and molecular basis for aberrant megakaryopoiesis in myelofibrosis, we performed single-cell transcriptome profiling of 135,929 CD34+ lineage− hematopoietic stem and progenitor cells (HSPCs), single-cell proteomics, genomics, and functional assays. We identified a bias toward megakaryocyte differentiation apparent from early multipotent stem cells in myelofibrosis and associated aberrant molecular signatures. A sub-fraction of myelofibrosis megakaryocyte progenitors (MkPs) are transcriptionally similar to healthy-donor MkPs, but the majority are disease specific, with distinct populations expressing fibrosis- and proliferation-associated genes. Mutant-clone HSPCs have increased expression of megakaryocyte-associated genes compared to wild-type HSPCs, and we provide early validation of G6B as a potential immunotherapy target. Our study paves the way for selective targeting of the myelofibrosis clone and illustrates the power of single-cell multi-omics to discover tumor-specific therapeutic targets and mediators of tissue fibrosis.
first_indexed 2024-03-07T01:34:08Z
format Journal article
id oxford-uuid:9492c159-cf08-454c-808e-515e17208b62
institution University of Oxford
language English
last_indexed 2024-03-07T01:34:08Z
publishDate 2020
publisher Elsevier
record_format dspace
spelling oxford-uuid:9492c159-cf08-454c-808e-515e17208b622022-03-26T23:40:24ZSingle-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targetsJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:9492c159-cf08-454c-808e-515e17208b62EnglishSymplectic ElementsElsevier2020Psaila, BWang, GRodriguez-Meira, ALi, RHeuston, EFMurphy, LYee, DHitchcock, ISSousos, NO'Sullivan, JAnderson, SSenis, YAWeinberg, OKCalicchio, MLNIH Intramural Sequencing CenterIskander, DRoyston, DMilojkovic, DRoberts, IBodine, DMThongjuea, SMead, AJMyelofibrosis is a severe myeloproliferative neoplasm characterized by increased numbers of abnormal bone marrow megakaryocytes that induce fibrosis, destroying the hematopoietic microenvironment. To determine the cellular and molecular basis for aberrant megakaryopoiesis in myelofibrosis, we performed single-cell transcriptome profiling of 135,929 CD34+ lineage− hematopoietic stem and progenitor cells (HSPCs), single-cell proteomics, genomics, and functional assays. We identified a bias toward megakaryocyte differentiation apparent from early multipotent stem cells in myelofibrosis and associated aberrant molecular signatures. A sub-fraction of myelofibrosis megakaryocyte progenitors (MkPs) are transcriptionally similar to healthy-donor MkPs, but the majority are disease specific, with distinct populations expressing fibrosis- and proliferation-associated genes. Mutant-clone HSPCs have increased expression of megakaryocyte-associated genes compared to wild-type HSPCs, and we provide early validation of G6B as a potential immunotherapy target. Our study paves the way for selective targeting of the myelofibrosis clone and illustrates the power of single-cell multi-omics to discover tumor-specific therapeutic targets and mediators of tissue fibrosis.
spellingShingle Psaila, B
Wang, G
Rodriguez-Meira, A
Li, R
Heuston, EF
Murphy, L
Yee, D
Hitchcock, IS
Sousos, N
O'Sullivan, J
Anderson, S
Senis, YA
Weinberg, OK
Calicchio, ML
NIH Intramural Sequencing Center
Iskander, D
Royston, D
Milojkovic, D
Roberts, I
Bodine, DM
Thongjuea, S
Mead, AJ
Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
title Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
title_full Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
title_fullStr Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
title_full_unstemmed Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
title_short Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
title_sort single cell analyses reveal megakaryocyte biased hematopoiesis in myelofibrosis and identify mutant clone specific targets
work_keys_str_mv AT psailab singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT wangg singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT rodriguezmeiraa singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT lir singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT heustonef singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT murphyl singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT yeed singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT hitchcockis singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT sousosn singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT osullivanj singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT andersons singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT senisya singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT weinbergok singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT calicchioml singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT nihintramuralsequencingcenter singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT iskanderd singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT roystond singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT milojkovicd singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT robertsi singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT bodinedm singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT thongjueas singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets
AT meadaj singlecellanalysesrevealmegakaryocytebiasedhematopoiesisinmyelofibrosisandidentifymutantclonespecifictargets