Recognizing the fold of a protein structure.

Recognizing the fold of a protein structure.

This paper reports a graph-theoretic program, GRATH, that rapidly, and accurately, matches a novel structure against a library of domain structures to find the most similar ones. GRATH generates distributions of scores by comparing the novel domain against the different types of folds that have been...

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí:	Harrison, A, Pearl, F, Sillitoe, I, Slidel, T, Mott, R, Thornton, J, Orengo, C
Formáid:	Journal article
Teanga:	English
Foilsithe / Cruthaithe:	2003

Míreanna comhchosúla

Quantifying the similarities within fold space.
de réir: Harrison, A, et al.
Foilsithe / Cruthaithe: (2002)

CATHEDRAL: a fast and effective algorithm to predict folds and domain boundaries from multidomain protein structures.
de réir: Oliver C Redfern, et al.
Foilsithe / Cruthaithe: (2007-11-01)

A folding pathway-dependent score to recognize membrane proteins.
de réir: Hamid Hadi-Alijanvand, et al.
Foilsithe / Cruthaithe: (2011-01-01)

Heme proteins--diversity in structural characteristics, function, and folding.
de réir: Smith, L, et al.
Foilsithe / Cruthaithe: (2010)

AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms
de réir: Nicola Bordin, et al.
Foilsithe / Cruthaithe: (2023-02-01)

Structural motifs recurring in different folds recognize the same ligand fragments
de réir: Incani Ottaviano, et al.
Foilsithe / Cruthaithe: (2009-06-01)

Friends in need: How chaperonins recognize and remodel proteins that require folding assistance
de réir: George Stan, et al.
Foilsithe / Cruthaithe: (2022-11-01)

Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies.
de réir: Nicholas Furnham, et al.
Foilsithe / Cruthaithe: (2012-01-01)

FLORA: a novel method to predict protein function from structure in diverse superfamilies.
de réir: Oliver C Redfern, et al.
Foilsithe / Cruthaithe: (2009-08-01)

Dissecting peripheral protein-membrane interfaces.
de réir: Thibault Tubiana, et al.
Foilsithe / Cruthaithe: (2022-12-01)

Protein folding in silico : protein folding versus protein structure prediction /
de réir: Roterman-Konieczna, Irena
Foilsithe / Cruthaithe: (2012)

Protein Folding Structures: Formation of Folding Structures Based on Probability Theory
de réir: Mitsuaki Narita, et al.
Foilsithe / Cruthaithe: (2016-12-01)

FtsH degrades dihydrofolate reductase by recognizing a partially folded species
de réir: Morehouse, Juhee P., et al.
Foilsithe / Cruthaithe: (2022)

Identification of Protein Folding Cores Using Charge Center Model of Protein Structure
de réir: Ivan Y. Torshin, et al.
Foilsithe / Cruthaithe: (2002-01-01)

Protein folding
de réir: Cohen, F
Foilsithe / Cruthaithe: (1980)

Protein folding /
de réir: Walters, Eric C.
Foilsithe / Cruthaithe: (c201)

Structural characteristics of novel protein folds.
de réir: Narcis Fernandez-Fuentes, et al.
Foilsithe / Cruthaithe: (2010-04-01)

Protein structural analysis, folding, and design/
de réir: Hatano, M. (Masahiro)
Foilsithe / Cruthaithe: (1990)

Fold usage on genomes and protein fold evolution.
de réir: Abeln, S, et al.
Foilsithe / Cruthaithe: (2005)

Directionality in protein fold prediction
de réir: Ellis, J, et al.
Foilsithe / Cruthaithe: (2010)

Protein Folding: Search for Basic Physical Models
de réir: Ivan Y. Torshin, et al.
Foilsithe / Cruthaithe: (2003-01-01)

Minds at Play: Using an Online Protein Folding Game, FoldIt, To Support Student Learning about Protein Folding, Structure, and the Scientific Process
de réir: Rebecca Rashid Achterman
Foilsithe / Cruthaithe: (2019-01-01)

Protein fold recognition by mapping predicted secondary structures.
de réir: Russell, R, et al.
Foilsithe / Cruthaithe: (1996)

Current structure predictors are not learning the physics of protein folding
de réir: Outeiral, C, et al.
Foilsithe / Cruthaithe: (2022)

Current structure predictors are not learning the physics of protein folding
de réir: Outeiral, C, et al.
Foilsithe / Cruthaithe: (2022)

Protein structure generation via folding diffusion
de réir: Kevin E. Wu, et al.
Foilsithe / Cruthaithe: (2024-02-01)

The protein folding problem and tertiary structure prediction /
de réir: Merz, Kenneth M., et al.
Foilsithe / Cruthaithe: (1994)

Improved photo-CIDNP methods for studying protein structure and folding.
de réir: Maeda, K, et al.
Foilsithe / Cruthaithe: (2000)

Protein folding /
de réir: Creighton, Thomas E.
Foilsithe / Cruthaithe: (1992)

Bioinformatics : genes, proteins and computers /
de réir: Orengo, Christine A, et al.
Foilsithe / Cruthaithe: (2003)

Recognizing public value /
de réir: Moore, Mark Harrison.
Foilsithe / Cruthaithe: (2013)

Sampling of structure and sequence space of small protein folds
de réir: Thomas W. Linsky, et al.
Foilsithe / Cruthaithe: (2022-11-01)

A structural basis for cellular uptake of GST-fold proteins.
de réir: Melanie J Morris, et al.
Foilsithe / Cruthaithe: (2011-01-01)

THERMAL AND ORGANIC MATTER MODELING IN THE FAULT BEND FOLD AND FAULT PROPAGATION FOLD STRUCTURAL MODELS
de réir: L. F SARMIENTO R, et al.
Foilsithe / Cruthaithe: (1997-01-01)

Directionality in protein fold prediction
de réir: Srivastava Sheenal, et al.
Foilsithe / Cruthaithe: (2010-04-01)

Glycoprotein folding and quality-control mechanisms in protein-folding diseases
de réir: Sean P. Ferris, et al.
Foilsithe / Cruthaithe: (2014-03-01)

Photo-CIDNP and protein folding
de réir: Lyon, C
Foilsithe / Cruthaithe: (1999)

Protein folding and structure prediction: biological and physical perspectives
de réir: Chonofsky, MA
Foilsithe / Cruthaithe: (2020)

AlphaFold prediction of structural ensembles of disordered proteins
de réir: Z. Faidon Brotzakis, et al.
Foilsithe / Cruthaithe: (2025-02-01)

Viral capsid proteins are segregated in structural fold space.
de réir: Shanshan Cheng, et al.
Foilsithe / Cruthaithe: (2013-01-01)