Control of nitrogen fixation and ammonia excretion in Azorhizobium caulinodans

<p>Due to the costly energy demands of nitrogen (N) fixation, diazotrophic bacteria have evolved complex regulatory networks that permit expression of the catalyst nitrogenase only under conditions of N starvation, whereas the same condition stimulates upregulation of high-affinity ammonia (NH...

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Bibliographic Details
Main Authors: Haskett, T, Karunakaran, R, Bueno Batista, M, Dixon, R, Poole, P
Format: Journal article
Language:English
Published: Public Library of Science 2022
Description
Summary:<p>Due to the costly energy demands of nitrogen (N) fixation, diazotrophic bacteria have evolved complex regulatory networks that permit expression of the catalyst nitrogenase only under conditions of N starvation, whereas the same condition stimulates upregulation of high-affinity ammonia (NH<sub>3</sub>) assimilation by glutamine synthetase (GS), preventing excess release of excess NH<sub>3</sub>&nbsp;for plants. Diazotrophic bacteria can be engineered to excrete NH<sub>3</sub>&nbsp;by interference with GS, however control is required to minimise growth penalties and prevent unintended provision of NH<sub>3</sub>&nbsp;to non-target plants. Here, we tested two strategies to control GS regulation and NH<sub>3</sub>&nbsp;excretion in our model cereal symbiont&nbsp;<em>Azorhizobium caulinodans Ac</em>LP, a derivative of ORS571. We first attempted to recapitulate previous work where mutation of both P<sub>II</sub>&nbsp;homologues&nbsp;<em>glnB</em>&nbsp;and&nbsp;<em>glnK</em>&nbsp;stimulated GS shutdown but found that one of these genes was essential for growth. Secondly, we expressed unidirectional adenylyl transferases (uATs) in a &Delta;<em>glnE</em>&nbsp;mutant of&nbsp;<em>Ac</em>LP which permitted strong GS shutdown and excretion of NH<sub>3</sub>&nbsp;derived from N<sub>2</sub>&nbsp;fixation and completely alleviated negative feedback regulation on nitrogenase expression. We placed a&nbsp;<em>uAT</em>&nbsp;allele under control of the NifA-dependent promoter P<em>nifH</em>, permitting GS shutdown and NH<sub>3</sub>&nbsp;excretion specifically under microaerobic conditions, the same cue that initiates N<sub>2</sub>&nbsp;fixation, then deleted&nbsp;<em>nifA</em>&nbsp;and transferred a rhizopine&nbsp;<em>nifA</em><sub><em>L94Q/D95Q</em></sub><em>-rpoN</em>&nbsp;controller plasmid into this strain, permitting coupled rhizopine-dependent activation of N<sub>2</sub>&nbsp;fixation and NH<sub>3</sub>&nbsp;excretion. This highly sophisticated and multi-layered control circuitry brings us a step closer to the development of a "synthetic symbioses&rdquo; where N<sub>2</sub>&nbsp;fixation and NH<sub>3</sub>&nbsp;excretion could be specifically activated in diazotrophic bacteria colonising transgenic rhizopine producing cereals, targeting delivery of fixed N to the crop while preventing interaction with non-target plants.</p>