Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency

<p>Designing effective antileukemic immunotherapy will require understanding mechanisms underlying tumor control or resistance. Here, we report a mechanism of escape from immunologic targeting in an acute myeloid leukemia (AML) patient, who relapsed 1 year after immunotherapy with engineered T...

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Main Authors: Lahman, MC, Schmitt, TM, Paulson, KG, Vigneron, N, Buenrostro, D, Wagener, FD, Voillet, V, Martin, L, Gottardo, R, Bielas, J, McElrath, JM, Stirewalt, DL, Pogosova-Agadjanyan, EL, Yeung, CC, Pierce, RH, Egan, DN, Bar, M, Hendrie, PC, Kinsella, S, Vakil, A, Butler, J, Chaffee, M, Linton, J, McAfee, MS, Hunter, DS, Bleakley, M, Rongvaux, A, Van den Eynde, BJ, Chapuis, AG, Greenberg, PD
Format: Journal article
Language:English
Published: American Association for the Advancement of Science 2022
_version_ 1797110095248621568
author Lahman, MC
Schmitt, TM
Paulson, KG
Vigneron, N
Buenrostro, D
Wagener, FD
Voillet, V
Martin, L
Gottardo, R
Bielas, J
McElrath, JM
Stirewalt, DL
Pogosova-Agadjanyan, EL
Yeung, CC
Pierce, RH
Egan, DN
Bar, M
Hendrie, PC
Kinsella, S
Vakil, A
Butler, J
Chaffee, M
Linton, J
McAfee, MS
Hunter, DS
Bleakley, M
Rongvaux, A
Van den Eynde, BJ
Chapuis, AG
Greenberg, PD
author_facet Lahman, MC
Schmitt, TM
Paulson, KG
Vigneron, N
Buenrostro, D
Wagener, FD
Voillet, V
Martin, L
Gottardo, R
Bielas, J
McElrath, JM
Stirewalt, DL
Pogosova-Agadjanyan, EL
Yeung, CC
Pierce, RH
Egan, DN
Bar, M
Hendrie, PC
Kinsella, S
Vakil, A
Butler, J
Chaffee, M
Linton, J
McAfee, MS
Hunter, DS
Bleakley, M
Rongvaux, A
Van den Eynde, BJ
Chapuis, AG
Greenberg, PD
author_sort Lahman, MC
collection OXFORD
description <p>Designing effective antileukemic immunotherapy will require understanding mechanisms underlying tumor control or resistance. Here, we report a mechanism of escape from immunologic targeting in an acute myeloid leukemia (AML) patient, who relapsed 1 year after immunotherapy with engineered T cells expressing a human leukocyte antigen A*02 (HLA-A2)&ndash;restricted T cell receptor (TCR) specific for a Wilms&rsquo; tumor antigen 1 epitope, WT1<sub>126&ndash;134</sub>&nbsp;(T<sub>TCR-C4</sub>). Resistance occurred despite persistence of functional therapeutic T cells and continuous expression of WT1 and HLA-A2 by the patient&rsquo;s AML cells. Analysis of the recurrent AML revealed expression of the standard proteasome, but limited expression of the immunoproteasome, specifically the beta subunit 1i (&beta;1i), which is required for presentation of WT1<sub>126&ndash;134</sub>. An analysis of a second patient treated with T<sub>TCR-C4</sub>&nbsp;demonstrated specific loss of AML cells coexpressing &beta;1i and WT1. To determine whether the WT1 protein continued to be processed and presented in the absence of immunoproteasome processing, we identified and tested a TCR targeting an alternative, HLA-A2&ndash;restricted WT1<sub>37&ndash;45</sub>&nbsp;epitope that was generated by immunoproteasome-deficient cells, including WT1-expressing solid tumor lines. T cells expressing this TCR (T<sub>TCR37&ndash;45</sub>) killed the first patients&rsquo; relapsed AML resistant to WT1<sub>126&ndash;134</sub>&nbsp;targeting, as well as other primary AML, in vitro. T<sub>TCR37&ndash;45</sub>&nbsp;controlled solid tumor lines lacking immunoproteasome subunits both in vitro and in an NSG mouse model. As proteasome composition can vary in AML, defining and preferentially targeting these proteasome-independent epitopes may maximize therapeutic efficacy and potentially circumvent AML immune evasion by proteasome-related immunoediting.</p>
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spelling oxford-uuid:a3bba4bf-5218-4646-a65e-4685127a7fbf2023-07-10T14:58:27ZTargeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependencyJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:a3bba4bf-5218-4646-a65e-4685127a7fbfEnglishSymplectic ElementsAmerican Association for the Advancement of Science2022Lahman, MCSchmitt, TMPaulson, KGVigneron, NBuenrostro, DWagener, FDVoillet, VMartin, LGottardo, RBielas, JMcElrath, JMStirewalt, DLPogosova-Agadjanyan, ELYeung, CCPierce, RHEgan, DNBar, MHendrie, PCKinsella, SVakil, AButler, JChaffee, MLinton, JMcAfee, MSHunter, DSBleakley, MRongvaux, AVan den Eynde, BJChapuis, AGGreenberg, PD<p>Designing effective antileukemic immunotherapy will require understanding mechanisms underlying tumor control or resistance. Here, we report a mechanism of escape from immunologic targeting in an acute myeloid leukemia (AML) patient, who relapsed 1 year after immunotherapy with engineered T cells expressing a human leukocyte antigen A*02 (HLA-A2)&ndash;restricted T cell receptor (TCR) specific for a Wilms&rsquo; tumor antigen 1 epitope, WT1<sub>126&ndash;134</sub>&nbsp;(T<sub>TCR-C4</sub>). Resistance occurred despite persistence of functional therapeutic T cells and continuous expression of WT1 and HLA-A2 by the patient&rsquo;s AML cells. Analysis of the recurrent AML revealed expression of the standard proteasome, but limited expression of the immunoproteasome, specifically the beta subunit 1i (&beta;1i), which is required for presentation of WT1<sub>126&ndash;134</sub>. An analysis of a second patient treated with T<sub>TCR-C4</sub>&nbsp;demonstrated specific loss of AML cells coexpressing &beta;1i and WT1. To determine whether the WT1 protein continued to be processed and presented in the absence of immunoproteasome processing, we identified and tested a TCR targeting an alternative, HLA-A2&ndash;restricted WT1<sub>37&ndash;45</sub>&nbsp;epitope that was generated by immunoproteasome-deficient cells, including WT1-expressing solid tumor lines. T cells expressing this TCR (T<sub>TCR37&ndash;45</sub>) killed the first patients&rsquo; relapsed AML resistant to WT1<sub>126&ndash;134</sub>&nbsp;targeting, as well as other primary AML, in vitro. T<sub>TCR37&ndash;45</sub>&nbsp;controlled solid tumor lines lacking immunoproteasome subunits both in vitro and in an NSG mouse model. As proteasome composition can vary in AML, defining and preferentially targeting these proteasome-independent epitopes may maximize therapeutic efficacy and potentially circumvent AML immune evasion by proteasome-related immunoediting.</p>
spellingShingle Lahman, MC
Schmitt, TM
Paulson, KG
Vigneron, N
Buenrostro, D
Wagener, FD
Voillet, V
Martin, L
Gottardo, R
Bielas, J
McElrath, JM
Stirewalt, DL
Pogosova-Agadjanyan, EL
Yeung, CC
Pierce, RH
Egan, DN
Bar, M
Hendrie, PC
Kinsella, S
Vakil, A
Butler, J
Chaffee, M
Linton, J
McAfee, MS
Hunter, DS
Bleakley, M
Rongvaux, A
Van den Eynde, BJ
Chapuis, AG
Greenberg, PD
Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency
title Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency
title_full Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency
title_fullStr Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency
title_full_unstemmed Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency
title_short Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency
title_sort targeting an alternate wilms tumor antigen 1 peptide bypasses immunoproteasome dependency
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