Recent advances in understanding σ70-dependent transcription initiation mechanisms

Recent advances in understanding σ70-dependent transcription initiation mechanisms

Prokaryotic transcription is one of the most studied biological systems, with relevance to many fields including the development and use of antibiotics, the construction of synthetic gene networks, and the development of many cutting-edge methodologies. Here, we discuss recent structural, biochemica...

Disgrifiad llawn

Manylion Llyfryddiaeth
Prif Awduron:	Mazumder, A, Kapanidis, A
Fformat:	Journal article
Iaith:	English
Cyhoeddwyd:	Elsevier 2019

Eitemau Tebyg

Structural basis of ECF-σ-factor-dependent transcription initiation
gan: Wei Lin, et al.
Cyhoeddwyd: (2019-02-01)

Transcription initiation at a consensus bacterial promoter proceeds via a 'bind-unwind-load-and-lock' mechanism
gan: Mazumder, A, et al.
Cyhoeddwyd: (2021)

Retention of transcription initiation factor sigma70 in transcription elongation: single-molecule analysis.
gan: Kapanidis, A, et al.
Cyhoeddwyd: (2005)

Transcription initiation at a consensus bacterial promoter proceeds via a ‘bind-unwind-load-and-lock’ mechanism
gan: Abhishek Mazumder, et al.
Cyhoeddwyd: (2021-10-01)

Structural Insight into the Mechanism of σ32-Mediated Transcription Initiation of Bacterial RNA Polymerase
gan: Qiang Lu, et al.
Cyhoeddwyd: (2023-04-01)

Structural basis for transcription initiation by bacterial ECF σ factors
gan: Lingting Li, et al.
Cyhoeddwyd: (2019-03-01)

The contribution of σ70 and σN factors to expression of class II pilE in Neisseria meningitidis
gan: Lobanovska, M, et al.
Cyhoeddwyd: (2019)

Evidence for a compact σ70 conformation in vitro and in vivo
gan: Khalil Joron, et al.
Cyhoeddwyd: (2024-06-01)

Systematic dissection of σ70 sequence diversity and function in bacteria
gan: Jimin Park, et al.
Cyhoeddwyd: (2021-08-01)

Initial transcription by RNA polymerase proceeds through a DNA-scrunching mechanism.
gan: Kapanidis, A, et al.
Cyhoeddwyd: (2006)

Recent advances in the characterization of Crl, the unconventional activator of the stress sigma factor σS/RpoS
gan: Cavaliere Paola, et al.
Cyhoeddwyd: (2016-06-01)

Recent advances in understanding of meiosis initiation and the apomictic pathway in plants
gan: Chung-Ju Rachel Wang, et al.
Cyhoeddwyd: (2014-09-01)

Unconventional Type III Halogen···Halogen Interactions: A Quantum Mechanical Elucidation of σ‑Hole···σ-Hole and Di-σ-Hole Interactions
gan: Mahmoud A. A. Ibrahim, et al.
Cyhoeddwyd: (2020-08-01)

Structure of the transcription open complex of distinct σI factors
gan: Jie Li, et al.
Cyhoeddwyd: (2023-10-01)

Single-Molecule Studies of Transcription Initiation using a Vesicle Approach
gan: Llumigusin, D, et al.
Cyhoeddwyd: (2012)

SAPPHIRE: a neural network based classifier for σ70 promoter prediction in Pseudomonas
gan: Lucas Coppens, et al.
Cyhoeddwyd: (2020-09-01)

Multiplicity dependence of σ ψ (2 S ) /σ J/ψ in pp collisions at s = 13 TeV
gan: Aaij, R, et al.
Cyhoeddwyd: (2024)

Multiplicity dependence of σ ψ(2S) /σ J/ψ in pp collisions at s $$ \sqrt{s} $$ = 13 TeV
gan: The LHCb collaboration, et al.
Cyhoeddwyd: (2024-05-01)

Conservation of σ28-Dependent Non-Coding RNA Paralogs and Predicted σ54-Dependent Targets in Thermophilic Campylobacter Species.
gan: My Thanh Le, et al.
Cyhoeddwyd: (2015-01-01)

Observation of the heavy baryons Σb and Σb*
gan: Aaltonen, T, et al.
Cyhoeddwyd: (2007)

Translocation of sigma(70) with RNA polymerase during transcription: fluorescence resonance energy transfer assay for movement relative to DNA.
gan: Mukhopadhyay, J, et al.
Cyhoeddwyd: (2001)

PromoterPredict: sequence-based modelling of Escherichia coli σ70 promoter strength yields logarithmic dependence between promoter strength and sequence
gan: Ramit Bharanikumar, et al.
Cyhoeddwyd: (2018-11-01)

REC domain stabilizes the active heptamer of σ54-dependent transcription factor, FleR from Pseudomonas aeruginosa
gan: Pankaj Kumar Sahoo, et al.
Cyhoeddwyd: (2023-12-01)

Genetic analysis of the <it>Staphylococcus epidermidis </it>Macromolecular Synthesis Operon: Serp1129 is an ATP binding protein and <it>sigA </it>transcription is regulated by both σ<sup>A</sup>- and σ<sup>B</sup>-dependent promoters
gan: Hinrichs Steven H, et al.
Cyhoeddwyd: (2010-01-01)

Two enhancer binding proteins activate σ54-dependent transcription of a quorum regulatory RNA in a bacterial symbiont
gan: Ericka D Surrett, et al.
Cyhoeddwyd: (2023-05-01)

New core promoter element in RNA polymerase II-dependent transcription: sequence-specific DNA binding by transcription factor IIB.
gan: Lagrange, T, et al.
Cyhoeddwyd: (1998)

Real-time transcription initiation by E. coli RNA polymerase in vitro and in vivo
gan: Plochowietz, A, et al.
Cyhoeddwyd: (2015)

Recent Advances in the Understanding of Molecular Mechanisms of Resistance in Noctuid Pests
gan: Gaëlle Le Goff, et al.
Cyhoeddwyd: (2021-07-01)

Recent advances in the understanding of cilia mechanisms and their applications as therapeutic targets
gan: Masaki Saito, et al.
Cyhoeddwyd: (2023-09-01)

Recent advances in understanding the auditory cortex
gan: King, A, et al.
Cyhoeddwyd: (2018)

Measurement of the masses and widths of the bottom baryons Σb± and Σb*±
gan: Aaltonen, T, et al.
Cyhoeddwyd: (2012)

σ-Algebra and σ-Baire in Fuzzy Soft Setting
gan: Shuker Mahmood Khalil, et al.
Cyhoeddwyd: (2018-01-01)

The Bifurcated σ-Hole···σ-Hole Stacking Interactions
gan: Yu Zhang, et al.
Cyhoeddwyd: (2022-02-01)

σ- ideals and generalized derivations in σ-prime rings
gan: M. Rais Khan, et al.
Cyhoeddwyd: (2013-12-01)

ICσOS: σOS for Intercloud Environments
gan: Chen, Kevin S.
Cyhoeddwyd: (2024)

Structural transitions in transcription initiation: Kinetic and single molecule kinetic analyses
gan: Mukhopadhyay, J, et al.
Cyhoeddwyd: (2001)

Mechanisms of PTPσ-Mediated Presynaptic Differentiation
gan: Claire Bomkamp, et al.
Cyhoeddwyd: (2019-05-01)

Understanding consciousness: Recent advances
gan: Srinivasan Thaiyar
Cyhoeddwyd: (2010-01-01)

Beam-spin asymmetry Σ for Σ− hyperon photoproduction off the neutron
gan: N. Zachariou, et al.
Cyhoeddwyd: (2022-04-01)

RNA polymerase pausing during initial transcription
gan: Duchi, D, et al.
Cyhoeddwyd: (2016)