Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline.

Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline.

Normalized spectral index quantification was recently presented as an accurate method of label-free quantitation, which improved spectral counting by incorporating the intensities of peptide MS/MS fragment ions into the calculation of protein abundance. We present SINQ, a tool implementing this meth...

Mô tả đầy đủ

Chi tiết về thư mục
Những tác giả chính:	Trudgian, D, Ridlova, G, Fischer, R, Mackeen, M, Ternette, N, Acuto, O, Kessler, B, Thomas, B
Định dạng:	Journal article
Ngôn ngữ:	English
Được phát hành:	2011

Những quyển sách tương tự

CPFP: a central proteomics facilities pipeline.
Bằng: Trudgian, D, et al.
Được phát hành: (2010)

The eighth SINQ Target Irradiation Program, STIP-VIII
Bằng: Yong Dai, et al.
Được phát hành: (2024-06-01)

Label-free quantitative proteomics reveals differentially regulated proteins influencing urolithiasis.
Bằng: Wright, C, et al.
Được phát hành: (2011)

Label-free quantitative proteomics reveals differentially regulated proteins influencing urolithiasis.
Bằng: Wright, C, et al.
Được phát hành: (2011)

QuaNCAT: quantitating proteome dynamics in primary cells.
Bằng: Howden, A, et al.
Được phát hành: (2013)

A quantitative label-free analysis of the extracellular proteome of human supraspinatus tendon reveals damage to the pericellular and elastic fibre niches in torn and aged tissue.
Bằng: Hakimi, O, et al.
Được phát hành: (2017)

QuaNCAT: Quantitating proteome dynamics in primary cells
Bằng: Howden, A, et al.
Được phát hành: (2013)

A method for large-scale identification of protein arginine methylation.
Bằng: Uhlmann, T, et al.
Được phát hành: (2012)

A quantitative label-free analysis of the extracellular proteome of human supraspinatus tendon reveals damage to the pericellular and elastic fibre niches in torn and aged tissue.
Bằng: Osnat Hakimi, et al.
Được phát hành: (2017-01-01)

Label-free quantitative proteomics reveals regulation of interferon-induced protein with tetratricopeptide repeats 3 (IFIT3) and 5'-3'-exoribonuclease 2 (XRN2) during respiratory syncytial virus infection.
Bằng: Ternette, N, et al.
Được phát hành: (2011)

Label-free quantitative proteomics reveals regulation of interferon-induced protein with tetratricopeptide repeats 3 (IFIT3) and 5'-3'-exoribonuclease 2 (XRN2) during respiratory syncytial virus infection
Bằng: Altun Mikael, et al.
Được phát hành: (2011-09-01)

Benchmarking Quantitative Performance in Label-Free Proteomics
Bằng: James A. Dowell, et al.
Được phát hành: (2021-01-01)

Novel MMP-9 substrates in cancer cells revealed by a label-free quantitative proteomics approach.
Bằng: Xu, D, et al.
Được phát hành: (2008)

Metaprotein expression modeling for label-free quantitative proteomics
Bằng: Lucas Joseph E, et al.
Được phát hành: (2012-05-01)

THE PROTEOME OF YOUNG AND HEALTHY HUMAN HAMSTRING
Bằng: Hakimi, O, et al.
Được phát hành: (2012)

Protein profiling in hepatocellular carcinoma by label-free quantitative proteomics in two west African populations
Bằng: Fye, H, et al.
Được phát hành: (2013)

Label-free quantitative proteomic analysis of adult Drosophila heads
Bằng: Yan Zhang, et al.
Được phát hành: (2022-12-01)

Discovery of candidate serum proteomic and metabolomic biomarkers in ankylosing spondylitis.
Bằng: Fischer, R, et al.
Được phát hành: (2012)

Quantitative mass spectrometry reveals dynamics of factor-inhibiting hypoxia-inducible factor-catalyzed hydroxylation
Bằng: Singleton, R, et al.
Được phát hành: (2011)

Quantitative mass spectrometry reveals dynamics of factor-inhibiting hypoxia-inducible factor-catalyzed hydroxylation.
Bằng: Singleton, R, et al.
Được phát hành: (2011)

Protein profiling in hepatocellular carcinoma by label-free quantitative proteomics in two west African populations.
Bằng: Haddy K S Fye, et al.
Được phát hành: (2013-01-01)

Identification of lysine acetylome in cervical cancer by label-free quantitative proteomics
Bằng: Lu Zhang, et al.
Được phát hành: (2020-05-01)

Data from quantitative label free proteomics analysis of rat spleen
Bằng: Khadar Dudekula, et al.
Được phát hành: (2016-09-01)

Correction: Protein Profiling in Hepatocellular Carcinoma by Label-Free Quantitative Proteomics in Two West African Populations.
Bằng: Haddy K. S. Fye, et al.
Được phát hành: (2013-01-01)

Proteomic-based identification of CD4-interacting proteins in human primary macrophages.
Bằng: Raposo, R, et al.
Được phát hành: (2011)

Benchmarking stable isotope labeling based quantitative proteomics.
Bằng: Altelaar, A, et al.
Được phát hành: (2013)

Benchmarking stable isotope labeling based quantitative proteomics.
Bằng: Altelaar, A, et al.
Được phát hành: (2013)

Applications of stable isotope dimethyl labeling in quantitative proteomics.
Bằng: Kovanich, D, et al.
Được phát hành: (2012)

Protocol for clickable photoaffinity labeling and quantitative chemical proteomics
Bằng: Wankyu Lee, et al.
Được phát hành: (2021-06-01)

Clinical biomarker discovery by SWATH-MS based label-free quantitative proteomics: impact of criteria for identification of differentiators and data normalization method
Bằng: Mythreyi Narasimhan, et al.
Được phát hành: (2019-05-01)

Proteomic-based identification of CD4-interacting proteins in human primary macrophages
Bằng: Saraiva Rapaso, R, et al.
Được phát hành: (2011)

Label-Free Quantitative Proteomics Unravel the Impacts of Salt Stress on Dendrobium huoshanense
Bằng: Cheng Song, et al.
Được phát hành: (2022-05-01)

A label-free quantitative shotgun proteomics analysis of rice grain development
Bằng: Koh Hee-Jong, et al.
Được phát hành: (2011-09-01)

Label-free quantitative proteomics identifies Smarca4 is involved in vascular calcification
Bằng: Chan Wang, et al.
Được phát hành: (2019-01-01)

The Succinated Proteome of FH-Mutant Tumours.
Bằng: Yang, M, et al.
Được phát hành: (2014)

Quantitative proteomics identification of seminal fluid proteins in male Drosophila melanogaster
Bằng: Sepil, I, et al.
Được phát hành: (2018)

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics.
Bằng: Boersema, P, et al.
Được phát hành: (2009)

Statistical methods for quantitative mass spectrometry proteomic experiments with labeling
Bằng: Oberg Ann L, et al.
Được phát hành: (2012-11-01)

Trends in the Design of New Isobaric Labeling Reagents for Quantitative Proteomics
Bằng: Remigiusz Bąchor, et al.
Được phát hành: (2019-02-01)

Quantitative phosphoproteome analysis unveils LAT as a modulator of CD3ζ and ZAP-70 tyrosine phosphorylation
Bằng: Salek, M, et al.
Được phát hành: (2013)