Lineage replacement and evolution captured by 3 years of the United Kingdom Coronavirus (COVID-19) Infection Survey

Lineage replacement and evolution captured by 3 years of the United Kingdom Coronavirus (COVID-19) Infection Survey

The Office for National Statistics Coronavirus (COVID-19) Infection Survey (ONS-CIS) is the largest surveillance study of SARS-CoV-2 positivity in the community, and collected data on the United Kingdom (UK) epidemic from April 2020 until March 2023 before being paused. Here, we report on the epidem...

書目詳細資料
Main Authors:	Lythgoe, KA, Golubchik, T, Hall, M, House, T, Cahuantzi, R, MacIntyre-Cockett, G, Fryer, H, Thomson, L, Nurtay, A, Ghafani, M, Buck, D, Green, A, Trebes, A, Piazza, P, Lonie, LJ, Studley, R, Rourke, E, Smith, D, Bashton, M, Nelson, A, Crown, M, McCann, C, Young, GR, Andre Nunes Dos Santos, R, Richards, Z, Tariq, A, Fraser, C, Diamond, I, Barrett, J, Walker, AS, Bonsall, D
其他作者:	Wellcome Sanger Institute COVID-19 Surveillance Team
格式:	Journal article
語言:	English
出版:	Royal Society 2023

相似書籍

Prevalence of persistent SARS-CoV-2 in a large community surveillance study
由: Ghafari, M, et al.
出版: (2024)

Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias
由: Fryer, HR, et al.
出版: (2023)

Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias.
由: Helen R Fryer, et al.
出版: (2023-08-01)

Correction: Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias.
由: Helen R Fryer, et al.
出版: (2023-10-01)

The mutational spectrum of SARS-CoV-2 genomic and antigenomic RNA
由: Zhao, L, et al.
出版: (2022)

ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens
由: Bowden, R, et al.
出版: (2015)

Unsupervised identification of significant lineages of SARS-CoV-2 through scalable machine learning methods
由: Cahuantzi, R, et al.
出版: (2024)

HIV genotyping and phylogenetics in the HPTN 071 (PopART) study: validation of a high-throughput sequencing assay for viral load quantification, genotyping, resistance testing and high-resolution transmission networking
由: Bonsall, D, et al.
出版: (2018)

SARS-CoV-2 within-host diversity and transmission
由: Lythgoe, KA, et al.
出版: (2020)

Spatial and temporal epidemiology of SARS-CoV-2 virus lineages in Teesside, UK, in 2020: effects of socio-economic deprivation, weather, and lockdown on lineage dynamics
由: Moss, E.D., et al.
出版: (2024-09-01)

A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples.
由: Batty, E, et al.
出版: (2013)

A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples
由: Batty, E, et al.
出版: (2013)

Resistance analysis of genotype 3 hepatitis C virus indicates subtypes inherently resistant to nonstructural protein 5A inhibitors
由: Smith, D, et al.
出版: (2018)

SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway
由: Willett, BJ, et al.
出版: (2022)

Characterisation of hepatitis C virus recombination in Cameroon using non-specific next generation sequencing.
由: Iles, J, et al.
出版: (2015)

Comparison of next generation sequencing technologies for the comprehensive assessment of full-length hepatitis C viral genomes
由: Ip, C, et al.
出版: (2016)

COVID-19 vaccination, risk-compensatory behaviours, and contacts in the UK
由: Buckell, J, et al.
出版: (2023)

Symptoms and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) positivity in the general population in the United Kingdom
由: Vihta, K-D, et al.
出版: (2021)

Castanet: a pipeline for rapid analysis of targeted multi-pathogen genomic data
由: Mayne, R, et al.
出版: (2024)

Modern geophysics in engineering geology /
由: McCann, D. M.
出版: (1997)

SARS-CoV-2 within-host diversity and transmission
由: Lythgoe, KA, et al.
出版: (2021)

Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing
由: Ferretti, L, et al.
出版: (2020)

Magnetometery for cryoEDM
由: McCann, M, et al.
出版: (2012)

A comprehensive genomics solution for HIV surveillance and clinical monitoring in low income settings
由: Bonsall, D, et al.
出版: (2020)

Distinct patterns of within-host virus populations between two subgroups of human respiratory syncytial virus
由: Lin, G-L, et al.
出版: (2021)

Вопросы правового содержания и значения гражданско-правовой ответственности
由: A.B. Nurtay
出版: (2019-02-01)

Omicron-associated changes in SARS-CoV-2 symptoms in the United Kingdom
由: Vihta, K, et al.
出版: (2022)

The Impact of Environmental Variability on Ecological Systems [electronic book]/
由: Vasseur, D. A., et al.
出版: (2007)

PHYLOSCANNER: Inferring transmission from within- and petween-host pathogen genetic diversity.
由: Wymant, C, et al.
出版: (2017)

Targeted metagenomics reveals association between severity and pathogen co-detection in infants with respiratory syncytial virus
由: Lin, G-L, et al.
出版: (2024)

EpiBeds: Data informed modelling of the COVID-19 hospital burden in England
由: Overton, CE, et al.
出版: (2022)

Medicine of Words: Purgative Reading in Richard Rolle’s Meditations on the Passion
由: McCann, D
出版: (2015)

Blood and Chocolate: Affective Layering in Swete Ihesu, now wil I synge
由: McCann, D
出版: (2015)

Dreadful Health: Fear and ‘Sowle-hele’ in The Prickynge of Love
由: McCann, D
出版: (2018)

Words of fire and fruit: the psychology of prayer words in the cloud of unknowing
由: McCann, D
出版: (2015)

Soul health: therapeutic reading in later Medieval England
由: McCann, D
出版: (2018)

Heaven and Health: Middle English devotion to Christ in its therapeutic contexts
由: McCann, D
出版: (2015)

Effect of Delta variant on viral burden and vaccine effectiveness against new SARS-CoV-2 infections in the UK
由: Pouwels, KB, et al.
出版: (2021)

Monitoring populations at increased risk for SARS-CoV-2 infection in the community using population-level demographic and behavioural surveillance
由: Pritchard, E, et al.
出版: (2021)

Effects of (±) 3,4-Methylenedioxymethamphetamine (MDMA) on Sleep and Circadian Rhythms
由: Una D. McCann, et al.
出版: (2007-01-01)