Evolutionary analysis reveals low coverage as the major challenge for protein interaction network alignment.

Evolutionary analysis reveals low coverage as the major challenge for protein interaction network alignment.

Local alignments of protein interaction networks have found little conservation among several species. While this could be a consequence of the incompleteness of interaction data-sets and presence of error, an intriguing prospect is that the process of network evolution is sufficient to erase any ev...

Mô tả đầy đủ

Chi tiết về thư mục
Những tác giả chính:	Ali, W, Deane, C
Định dạng:	Journal article
Ngôn ngữ:	English
Được phát hành:	2010

Những quyển sách tương tự

Functionally guided alignment of protein interaction networks for module detection.
Bằng: Ali, W, et al.
Được phát hành: (2009)

Alignment-free protein interaction network comparison.
Bằng: Ali, W, et al.
Được phát hành: (2014)

Protein protein interactions, evolutionary rate, abundance and age
Bằng: Saeed, R, et al.
Được phát hành: (2006)

Protein protein interactions, evolutionary rate, abundance and age.
Bằng: Saeed, R, et al.
Được phát hành: (2006)

Protein protein interactions, evolutionary rate, abundance and age
Bằng: Deane Charlotte M, et al.
Được phát hành: (2006-03-01)

Protein Interaction Networks and Their Statistical Analysis
Bằng: Ali, W, et al.
Được phát hành: (2011)

Unified Alignment of Protein-Protein Interaction Networks
Bằng: Noël Malod-Dognin, et al.
Được phát hành: (2017-04-01)

Aligning functional network constraint to evolutionary outcomes
Bằng: Katharina C. Wollenberg Valero
Được phát hành: (2020-05-01)

Optimizing a global alignment of protein interaction networks
Bằng: Ma, C.-Y., et al.
Được phát hành: (2013)

MP-T: improving membrane protein alignment for structure prediction.
Bằng: Hill, JR, et al.
Được phát hành: (2013)

A review of protein–protein interaction network alignment: From pathway comparison to global alignment
Bằng: Cheng-Yu Ma, et al.
Được phát hành: (2020-01-01)

Cross-species functional alignment reveals evolutionary hierarchy within the connectome
Bằng: Ting Xu, et al.
Được phát hành: (2020-12-01)

The importance of age and high degree, in protein-protein interaction networks.
Bằng: Rito, T, et al.
Được phát hành: (2012)

Increasing the accuracy of protein loop structure prediction with evolutionary constraints
Bằng: Marks, C, et al.
Được phát hành: (2018)

Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric space.
Bằng: Lei Huang, et al.
Được phát hành: (2017-01-01)

Evolutionary capacitance and control of protein stability in protein-protein interaction networks.
Bằng: Purushottam D Dixit, et al.
Được phát hành: (2013-04-01)

Evolutionary versatility of eukaryotic protein domains revealed by their bigram networks
Bằng: Xie Xueying, et al.
Được phát hành: (2011-08-01)

Combining Rigid Cellulose Nanocrystals and Soft Silk Proteins: Revealing Interactions and Alignment in Shear
Bằng: Ilona Leppänen, et al.
Được phát hành: (2023-07-01)

An enhanced evolutionary algorithm for requested coverage in wireless sensor networks /
Bằng: Kamal Jadidy Aval, 1980-, author 604703
Được phát hành: (2016)

An enhanced evolutionary algorithm for requested coverage in wireless sensor networks /
Bằng: Kamal Jadidy Aval, 1980-, author 604703, et al.
Được phát hành: (2016)

Environment specific substitution tables improve membrane protein alignment.
Bằng: Hill, JR, et al.
Được phát hành: (2011)

Analysis of Major Depression Risk Genes Reveals Evolutionary Conservation, Shared Phenotypes, and Extensive Genetic Interactions
Bằng: Saveen Sall, et al.
Được phát hành: (2021-07-01)

Local Geometry and Evolutionary Conservation of Protein Surfaces Reveal the Multiple Recognition Patches in Protein-Protein Interactions.
Bằng: Elodie Laine, et al.
Được phát hành: (2015-12-01)

Predicting and validating protein interactions using network structure
Bằng: Chen, P, et al.
Được phát hành: (2008)

The evolutionary dynamics of protein-protein interaction networks inferred from the reconstruction of ancient networks.
Bằng: Yuliang Jin, et al.
Được phát hành: (2013-01-01)

Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks
Bằng: Mercè Llabrés, et al.
Được phát hành: (2020-11-01)

Bioinspired Evolutionary Algorithm Based for Improving Network Coverage in Wireless Sensor Networks
Bằng: Mohammadjavad Abbasi, et al.
Được phát hành: (2014-01-01)

Revealing the challenges and efforts of routine immunization coverage in Nigeria
Bằng: Tolulope Joseph Ogunniyi
Được phát hành: (2024-08-01)

An inter-species protein-protein interaction network across vast evolutionary distance
Bằng: Zhong, Quan, et al.
Được phát hành: (2016)

An inter‐species protein–protein interaction network across vast evolutionary distance
Bằng: Quan Zhong, et al.
Được phát hành: (2016-04-01)

Coverage Capacity Optimization for Mobile Sensor Networks Based on Evolutionary Games
Bằng: Jianhua Liu, et al.
Được phát hành: (2014-11-01)

The function of communities in protein interaction networks at multiple scales
Bằng: Lewis, A, et al.
Được phát hành: (2010)

The function of communities in protein interaction networks at multiple scales
Bằng: Lewis, A, et al.
Được phát hành: (2010)

Coverage probability of cellular networks using interference alignment under imperfect CSI
Bằng: Raoul F. Guiazon, et al.
Được phát hành: (2016-11-01)

Alignment of non-covalent interactions at protein-protein interfaces.
Bằng: Hongbo Zhu, et al.
Được phát hành: (2008-01-01)

Improving protein-protein interaction prediction using evolutionary information from low-quality MSAs.
Bằng: Csilla Várnai, et al.
Được phát hành: (2017-01-01)

Differential evolutionary conservation of motif modes in the yeast protein interaction network
Bằng: Yu Chang-Yung, et al.
Được phát hành: (2006-04-01)

An evolutionary-network model reveals stratified interactions in the V3 loop of the HIV-1 envelope.
Bằng: Art F Y Poon, et al.
Được phát hành: (2007-11-01)

Global Alignment of Pairwise Protein Interaction Networks for Maximal Common Conserved Patterns
Bằng: Wenhong Tian, et al.
Được phát hành: (2013-01-01)

Exploring Pandora's box: potential and pitfalls of low coverage genome surveys for evolutionary biology.
Bằng: Florian Leese, et al.
Được phát hành: (2012-01-01)