Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack

Nucleic acid ADP-ribosylation and its associated enzymes involved in catalysis and hydrolysis are widespread among all kingdoms of life. Yet, its roles in mammalian and bacterial physiology including inter-/intraspecies conflicts are currently underexplored. Recently, several examples of enzymatic s...

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Main Authors: Lu, Y, Schuller, M, Bullen, N, Mikolcevic, P, Zonjic, I, Raggiaschi, R, Mikoc, A, Whitney, J, Ahel, I
Format: Journal article
Language:English
Published: Oxford University Press 2025
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author Lu, Y
Schuller, M
Bullen, N
Mikolcevic, P
Zonjic, I
Raggiaschi, R
Mikoc, A
Whitney, J
Ahel, I
author_facet Lu, Y
Schuller, M
Bullen, N
Mikolcevic, P
Zonjic, I
Raggiaschi, R
Mikoc, A
Whitney, J
Ahel, I
author_sort Lu, Y
collection OXFORD
description Nucleic acid ADP-ribosylation and its associated enzymes involved in catalysis and hydrolysis are widespread among all kingdoms of life. Yet, its roles in mammalian and bacterial physiology including inter-/intraspecies conflicts are currently underexplored. Recently, several examples of enzymatic systems for RNA ADP-ribosylation have been identified, showing that all major types of RNA species, including messenger RNA, ribosomal RNA, and transfer RNA, can be targeted by ADP-ribosyltransferases (ARTs) which attach ADP-ribose modifications either to nucleobases, the backbone ribose, or phosphate ends. Yet little is known about the reversibility of RNA ADP-ribosylation by ADP-ribosylhydrolases belonging to the macrodomain, ARH, or NADAR superfamilies. Here, we characterize the hydrolytic activity of ADP-ribosylhydrolases on RNA species ADP-ribosylated by mammalian and bacterial ARTs. We demonstrate that NADAR ADP-ribosylhydrolases are the only hydrolase family able to reverse guanosine RNA base ADP-ribosylation while they are inactive on phosphate-end RNA ADP-ribosylation. Furthermore, we reveal that macrodomain-containing PARG enzymes are the only hydrolase type with the ability for specific and efficient reversal of 2′-hydroxyl group RNA ADP-ribosylation catalysed by Pseudomonas aeruginosa effector toxin RhsP2. Moreover, using the RhsP2/bacterial PARG system as an example, we demonstrate that PARG enzymes can act as protective immunity enzymes against antibacterial RNA-targeting ART toxins.
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spelling oxford-uuid:aca40269-c832-4f90-91e5-eec9f25de95f2025-02-18T20:19:24ZDiscovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attackJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:aca40269-c832-4f90-91e5-eec9f25de95fEnglishJisc Publications RouterOxford University Press2025Lu, YSchuller, MBullen, NMikolcevic, PZonjic, IRaggiaschi, RMikoc, AWhitney, JAhel, INucleic acid ADP-ribosylation and its associated enzymes involved in catalysis and hydrolysis are widespread among all kingdoms of life. Yet, its roles in mammalian and bacterial physiology including inter-/intraspecies conflicts are currently underexplored. Recently, several examples of enzymatic systems for RNA ADP-ribosylation have been identified, showing that all major types of RNA species, including messenger RNA, ribosomal RNA, and transfer RNA, can be targeted by ADP-ribosyltransferases (ARTs) which attach ADP-ribose modifications either to nucleobases, the backbone ribose, or phosphate ends. Yet little is known about the reversibility of RNA ADP-ribosylation by ADP-ribosylhydrolases belonging to the macrodomain, ARH, or NADAR superfamilies. Here, we characterize the hydrolytic activity of ADP-ribosylhydrolases on RNA species ADP-ribosylated by mammalian and bacterial ARTs. We demonstrate that NADAR ADP-ribosylhydrolases are the only hydrolase family able to reverse guanosine RNA base ADP-ribosylation while they are inactive on phosphate-end RNA ADP-ribosylation. Furthermore, we reveal that macrodomain-containing PARG enzymes are the only hydrolase type with the ability for specific and efficient reversal of 2′-hydroxyl group RNA ADP-ribosylation catalysed by Pseudomonas aeruginosa effector toxin RhsP2. Moreover, using the RhsP2/bacterial PARG system as an example, we demonstrate that PARG enzymes can act as protective immunity enzymes against antibacterial RNA-targeting ART toxins.
spellingShingle Lu, Y
Schuller, M
Bullen, N
Mikolcevic, P
Zonjic, I
Raggiaschi, R
Mikoc, A
Whitney, J
Ahel, I
Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack
title Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack
title_full Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack
title_fullStr Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack
title_full_unstemmed Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack
title_short Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack
title_sort discovery of reversing enzymes for rna adp ribosylation reveals a possible defence module against toxic attack
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