Noise-induced mixing and multimodality in reaction networks

Noise-induced mixing and multimodality in reaction networks

We analyse a class of chemical reaction networks under mass-action kinetics involving multiple time scales, whose deterministic and stochastic models display qualitative differences. The networks are inspired by gene-regulatory networks and consist of a slow subnetwork, describing conversions among...

Descrizione completa

Dettagli Bibliografici
Autori principali:	Plesa, T, Erban, R, Othmer, H
Natura:	Journal article
Pubblicazione:	Cambridge University Press 2018

Documenti analoghi

Noise control for DNA computing
di: Plesa, T, et al.
Pubblicazione: (2018)

Chemical reaction systems with a homoclinic bifurcation: an inverse problem
di: Plesa, T, et al.
Pubblicazione: (2016)

From Individual to Collective Behavior in Bacterial Chemotaxis.
di: Erban, R, et al.
Pubblicazione: (2004)

From signal transduction to spatial pattern formation in E-coli: A paradigm for multiscale modeling in biology
di: Erban, R, et al.
Pubblicazione: (2005)

Taxis equations for amoeboid cells.
di: Erban, R, et al.
Pubblicazione: (2007)

Steady-state patterns in a reaction diffusion system with mixed boundary conditions
di: Maini, P, et al.
Pubblicazione: (1993)

STEADY-STATE PATTERNS IN A REACTION-DIFFUSION SYSTEM WITH MIXED BOUNDARY-CONDITIONS
di: Maini, P, et al.
Pubblicazione: (1993)

An equation-free computational approach for extracting population-level behavior from individual-based models of biological dispersal
di: Erban, R, et al.
Pubblicazione: (2005)

From Individual to Collective Behavior of Unicellular Organisms: Recent Results and Open Problems
di: Xue, C, et al.
Pubblicazione: (2009)

From Individual to Collective Behavior of Unicellular Organisms: Recent Results and Open Problems
di: Xue, C, et al.
Pubblicazione: (2009)

Identifiability of stochastically modelled reaction networks
di: Enciso, G, et al.
Pubblicazione: (2021)

Stochastic modelling of reaction-diffusion processes: algorithms for bimolecular reactions.
di: Erban, R, et al.
Pubblicazione: (2009)

Stochastic modelling of reaction-diffusion processes: algorithms for bimolecular reactions
di: Erban, R, et al.
Pubblicazione: (2009)

Pattern formation in Turing systems with mixed boundary conditions
di: Maini, P, et al.
Pubblicazione: (1993)

On Cucker-Smale model with noise and delay
di: Erban, R, et al.
Pubblicazione: (2016)

Reaction time for trimolecular reactions in compartment-based reaction-diffusion models
di: Li, F, et al.
Pubblicazione: (2018)

PATTERN-FORMATION IN GENERALIZED TURING SYSTEMS .1. STEADY-STATE PATTERNS IN SYSTEMS WITH MIXED BOUNDARY-CONDITIONS
di: Dillon, R, et al.
Pubblicazione: (1994)

Pattern formation in generalised Turing systems: I. Steady-state patterns in systems with mixed boundary conditions
di: Dillon, R, et al.
Pubblicazione: (1994)

Systematic design of reaction systems with prescribed behaviors: deterministic and stochastic methods
di: Plesa, T
Pubblicazione: (2018)

Reactive boundary conditions for stochastic simulations of reaction-diffusion processes
di: Erban, R, et al.
Pubblicazione: (2007)

Reactive boundary conditions for stochastic simulations of reaction-diffusion processes.
di: Erban, R, et al.
Pubblicazione: (2007)

Algebraic methods for chemical reaction networks with extrinsic noise
di: Adamer, MF
Pubblicazione: (2019)

Multiscale reaction-diffusion simulations with Smoldyn
di: Robinson, M, et al.
Pubblicazione: (2015)

Ambient noise multimode surface wave tomography
di: Kiwamu Nishida, et al.
Pubblicazione: (2024-02-01)

Multi-grid reaction-diffusion master equation: applications to morphogen gradient modelling
di: Erban, R, et al.
Pubblicazione: (2024)

Multi-Grid Reaction-Diffusion Master Equation: Applications to Morphogen Gradient Modelling
di: Erban, R, et al.
Pubblicazione: (2024)

Diffusive spatio-temporal noise in a first-passage time model for intracellular calcium release
di: Flegg, M, et al.
Pubblicazione: (2013)

A multimodal approach to ameliorate acute phase reaction induced by zoledronic acid
di: Chung-Hwan Chen, et al.
Pubblicazione: (2023-12-01)

The Two Regime method for optimizing stochastic reaction-diffusion simulations
di: Flegg, M, et al.
Pubblicazione: (2011)

The two-regime method for optimizing stochastic reaction-diffusion simulations.
di: Flegg, M, et al.
Pubblicazione: (2012)

Speakers exhibit a multimodal Lombard effect in noise
di: James Trujillo, et al.
Pubblicazione: (2021-08-01)

A practical guide to stochastic simulations of reaction-diffusion processes
di: Erban, R, et al.
Pubblicazione: (2007)

Stochastic analysis of chemical reaction networks using linear noise approximation
di: Cardelli, L, et al.
Pubblicazione: (2016)

Multiscale stochastic reaction–diffusion algorithms combining Markov chain models with stochastic partial differential equations
di: Kang, HW, et al.
Pubblicazione: (2019)

Analysis of Brownian dynamics simulations of reversible biomolecular reactions
di: Lipkova, J, et al.
Pubblicazione: (2010)

Analysis of Brownian Dynamics Simulations of Reversible Bimolecular Reactions
di: Lipkova, J, et al.
Pubblicazione: (2010)

Tree-Based Mix-Order Polynomial Fusion Network for Multimodal Sentiment Analysis
di: Jiajia Tang, et al.
Pubblicazione: (2023-01-01)

Multiscale stochastic reaction-diffusion modelling: application to actin dynamics in filopodia
di: Erban, R, et al.
Pubblicazione: (2012)

Quantification and reduction of Poisson-Gaussian mixed noise induced errors in ellipsometry
di: Jiang, Bo, et al.
Pubblicazione: (2022)

Quantification and reduction of Poisson-Gaussian mixed noise induced errors in ellipsometry
di: Jiang, Bo, et al.
Pubblicazione: (2022)