StatAlign 2.0: combining statistical alignment with RNA secondary structure prediction.
MOTIVATION: Comparative modeling of RNA is known to be important for making accurate secondary structure predictions. RNA structure prediction tools such as PPfold or RNAalifold use an aligned set of sequences in predictions. Obtaining a multiple alignment from a set of sequences is quite a challen...
Main Authors: | Arunapuram, P, Edvardsson, I, Golden, M, Anderson, J, Novák, A, Sükösd, Z, Hein, J |
---|---|
Format: | Journal article |
Language: | English |
Published: |
2013
|
Similar Items
-
StatAlign: an extendable software package for joint Bayesian estimation of alignments and evolutionary trees.
by: Novák, A, et al.
Published: (2008) -
Quantifying variances in comparative RNA secondary structure prediction.
by: Anderson, J, et al.
Published: (2013) -
Combining statistical alignment and phylogenetic footprinting to detect regulatory elements.
by: Satija, R, et al.
Published: (2008) -
Recursions for statistical multiple alignment.
by: Hein, J, et al.
Published: (2003) -
Gibbs sampler for statistical multiple alignment
by: Jensen, J, et al.
Published: (2005)