Simulated bacterial genomes for evaluating SNP calling pipelines

This archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". It contains a set of 254 SNP-containing genomes, VCFs containing nucmer and Parsnp strain-to-representative genome SNP ca...

Повний опис

Бібліографічні деталі
Автор: Bush, S
Формат: Dataset
Мова:English
Опубліковано: University of Oxford 2019
Опис
Резюме:This archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". It contains a set of 254 SNP-containing genomes, VCFs containing nucmer and Parsnp strain-to-representative genome SNP calls, and the final truth sets of SNPs used for evaluation.