Simulated bacterial genomes for evaluating SNP calling pipelines
This archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". It contains a set of 254 SNP-containing genomes, VCFs containing nucmer and Parsnp strain-to-representative genome SNP ca...
| Autor principal: | |
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| Formato: | Dataset |
| Idioma: | English |
| Publicado em: |
University of Oxford
2019
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| _version_ | 1826316920815616000 |
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| author | Bush, S |
| author_facet | Bush, S |
| author_sort | Bush, S |
| collection | OXFORD |
| description | This archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". It contains a set of 254 SNP-containing genomes, VCFs containing nucmer and Parsnp strain-to-representative genome SNP calls, and the final truth sets of SNPs used for evaluation. |
| first_indexed | 2024-03-07T03:21:29Z |
| format | Dataset |
| id | oxford-uuid:b795f881-0501-4470-b6ec-1d08c0d2317f |
| institution | University of Oxford |
| language | English |
| last_indexed | 2025-02-19T04:30:27Z |
| publishDate | 2019 |
| publisher | University of Oxford |
| record_format | dspace |
| spelling | oxford-uuid:b795f881-0501-4470-b6ec-1d08c0d2317f2024-12-18T16:07:48ZSimulated bacterial genomes for evaluating SNP calling pipelinesDatasethttp://purl.org/coar/resource_type/c_ddb1uuid:b795f881-0501-4470-b6ec-1d08c0d2317fEnglishORA DepositUniversity of Oxford2019Bush, SThis archive is provided as an online supplementary dataset for the Bush, et al. manuscript "Genomic diversity affects the accuracy of bacterial SNP calling pipelines". It contains a set of 254 SNP-containing genomes, VCFs containing nucmer and Parsnp strain-to-representative genome SNP calls, and the final truth sets of SNPs used for evaluation. |
| spellingShingle | Bush, S Simulated bacterial genomes for evaluating SNP calling pipelines |
| title | Simulated bacterial genomes for evaluating SNP calling pipelines |
| title_full | Simulated bacterial genomes for evaluating SNP calling pipelines |
| title_fullStr | Simulated bacterial genomes for evaluating SNP calling pipelines |
| title_full_unstemmed | Simulated bacterial genomes for evaluating SNP calling pipelines |
| title_short | Simulated bacterial genomes for evaluating SNP calling pipelines |
| title_sort | simulated bacterial genomes for evaluating snp calling pipelines |
| work_keys_str_mv | AT bushs simulatedbacterialgenomesforevaluatingsnpcallingpipelines |