An upper bound on the convergence rate of a second functional in optimal sequence alignment

Consider finite sequences X[1,n] = X1,...,Xn and Y[1,n] = Y1,...,Yn of length n, consisting of i.i.d. samples of random letters from a finite alphabet, and let S and T be chosen i.i.d. randomly from the unit ball in the space of symmetric scoring functions over this alphabet augmented by a gap symbo...

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Bibliographic Details
Main Authors: Hauser, R, Matzinger, H, Popescu, I
Format: Journal article
Published: Bernoulli Society for Mathematical Statistics 2017

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