Long-read single-cell sequencing using scCOLOR-seq

Single-cell sequencing allows for the measurement of sequence information from individual cells with next-generation sequencing (NGS). However, its application to third-generation sequencing platforms such as Oxford Nanopore has been challenging because of its lower basecalling accuracy. Here we des...

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Chi tiết về thư mục
Những tác giả chính: Philpott, M, Oppermann, U, Cribbs, AP
Tác giả khác: Arakawa, K
Định dạng: Book section
Ngôn ngữ:English
Được phát hành: Humana Press 2023
Miêu tả
Tóm tắt:Single-cell sequencing allows for the measurement of sequence information from individual cells with next-generation sequencing (NGS). However, its application to third-generation sequencing platforms such as Oxford Nanopore has been challenging because of its lower basecalling accuracy. Here we describe the method to perform highly accurate single-cell COrrected Long-Read sequencing (scCOLOR-seq) by droplet-based encapsulation of cells and sequencing using the Oxford Nanopore Sequencing system.