The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme

SARS-CoV-2 is a positive-sense RNA virus responsible for the Coronavirus Disease 2019 (COVID-19) pandemic, which continues to cause significant morbidity, mortality and economic strain. SARS-CoV-2 can cause severe respiratory disease and death in humans, highlighting the need for effective antiviral...

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Main Authors: Walker, AP, Fan, H, Keown, JR, Knight, ML, Grimes, JM, Fodor, E
Format: Journal article
Language:English
Published: Oxford University Press 2021
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author Walker, AP
Fan, H
Keown, JR
Knight, ML
Grimes, JM
Fodor, E
author_facet Walker, AP
Fan, H
Keown, JR
Knight, ML
Grimes, JM
Fodor, E
author_sort Walker, AP
collection OXFORD
description SARS-CoV-2 is a positive-sense RNA virus responsible for the Coronavirus Disease 2019 (COVID-19) pandemic, which continues to cause significant morbidity, mortality and economic strain. SARS-CoV-2 can cause severe respiratory disease and death in humans, highlighting the need for effective antiviral therapies. The RNA synthesis machinery of SARS-CoV-2 is an ideal drug target and consists of non-structural protein 12 (nsp12), which is directly responsible for RNA synthesis, and numerous co-factors involved in RNA proofreading and 5′ capping of viral RNAs. The formation of the 5′ 7-methylguanosine (m7G) cap structure is known to require a guanylyltransferase (GTase) as well as a 5′ triphosphatase and methyltransferases; however, the mechanism of SARS-CoV-2 RNA capping remains poorly understood. Here we find that SARS-CoV-2 nsp12 is involved in viral RNA capping as a GTase, carrying out the addition of a GTP nucleotide to the 5′ end of viral RNA via a 5′ to 5′ triphosphate linkage. We further show that the nsp12 NiRAN (nidovirus RdRp-associated nucleotidyltransferase) domain performs this reaction, and can be inhibited by remdesivir triphosphate, the active form of the antiviral drug remdesivir. These findings improve understanding of coronavirus RNA synthesis and highlight a new target for novel or repurposed antiviral drugs against SARS-CoV-2.
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spelling oxford-uuid:c5d76f5b-fd29-4877-a6b0-624a0c25e9bd2022-06-09T09:59:59ZThe SARS-CoV-2 RNA polymerase is a viral RNA capping enzymeJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:c5d76f5b-fd29-4877-a6b0-624a0c25e9bdEnglishSymplectic ElementsOxford University Press2021Walker, APFan, HKeown, JRKnight, MLGrimes, JMFodor, ESARS-CoV-2 is a positive-sense RNA virus responsible for the Coronavirus Disease 2019 (COVID-19) pandemic, which continues to cause significant morbidity, mortality and economic strain. SARS-CoV-2 can cause severe respiratory disease and death in humans, highlighting the need for effective antiviral therapies. The RNA synthesis machinery of SARS-CoV-2 is an ideal drug target and consists of non-structural protein 12 (nsp12), which is directly responsible for RNA synthesis, and numerous co-factors involved in RNA proofreading and 5′ capping of viral RNAs. The formation of the 5′ 7-methylguanosine (m7G) cap structure is known to require a guanylyltransferase (GTase) as well as a 5′ triphosphatase and methyltransferases; however, the mechanism of SARS-CoV-2 RNA capping remains poorly understood. Here we find that SARS-CoV-2 nsp12 is involved in viral RNA capping as a GTase, carrying out the addition of a GTP nucleotide to the 5′ end of viral RNA via a 5′ to 5′ triphosphate linkage. We further show that the nsp12 NiRAN (nidovirus RdRp-associated nucleotidyltransferase) domain performs this reaction, and can be inhibited by remdesivir triphosphate, the active form of the antiviral drug remdesivir. These findings improve understanding of coronavirus RNA synthesis and highlight a new target for novel or repurposed antiviral drugs against SARS-CoV-2.
spellingShingle Walker, AP
Fan, H
Keown, JR
Knight, ML
Grimes, JM
Fodor, E
The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme
title The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme
title_full The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme
title_fullStr The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme
title_full_unstemmed The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme
title_short The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme
title_sort sars cov 2 rna polymerase is a viral rna capping enzyme
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