Estimating recombination rates from population genetic data.

Estimating recombination rates from population genetic data.

We introduce a new method for estimating recombination rates from population genetic data. The method uses a computationally intensive statistical procedure (importance sampling) to calculate the likelihood under a coalescent-based model. Detailed comparisons of the new algorithm with two existing m...

Descripció completa

Dades bibliogràfiques
Autors principals:	Fearnhead, P, Donnelly, P
Format:	Journal article
Idioma:	English
Publicat:	2001

Ítems similars

Approximate likelihood methods for estimating local recombination rates
per: Fearnhead, P, et al.
Publicat: (2002)

The estimation of recombination rates from population genetic data
per: Auton, A
Publicat: (2007)

Estimating recombination rates from population-genetic data.
per: Stumpf, M, et al.
Publicat: (2003)

Application of coalescent methods to reveal fine-scale rate variation and recombination hotspots.
per: Fearnhead, P, et al.
Publicat: (2004)

Estimating recombination rates from genetic variation in humans.
per: Auton, A, et al.
Publicat: (2012)

A coalescent-based method for detecting and estimating recombination from gene sequences.
per: McVean, G, et al.
Publicat: (2002)

Estimating meiotic gene conversion rates from population genetic data.
per: Gay, J, et al.
Publicat: (2007)

High recombination rate in herpes simplex virus type 1 natural populations suggests significant co-infection.
per: Bowden, R, et al.
Publicat: (2004)

Recombination rate estimation in the presence of hotspots.
per: Auton, A, et al.
Publicat: (2007)

The influence of recombination on human genetic diversity.
per: Spencer, C, et al.
Publicat: (2006)

The influence of recombination on human genetic diversity.
per: Spencer, C, et al.
Publicat: (2006)

DUAL PROCESSES IN POPULATION-GENETICS
per: Donnelly, P
Publicat: (1986)

The fine-scale structure of recombination rate variation in the human genome.
per: Mcvean, G, et al.
Publicat: (2004)

A GENEALOGICAL APPROACH TO VARIABLE-POPULATION-SIZE MODELS IN POPULATION-GENETICS
per: Donnelly, P
Publicat: (1986)

Inference in molecular population genetics
per: Stephens, M, et al.
Publicat: (2000)

THE TRANSIENT-BEHAVIOR OF THE MORAN MODEL IN POPULATION-GENETICS
per: Donnelly, P
Publicat: (1984)

Recombination and population structure in Salmonella enterica.
per: Didelot, X, et al.
Publicat: (2011)

SelSim: a program to simulate population genetic data with natural selection and recombination.
per: Spencer, C, et al.
Publicat: (2004)

A fine-scale map of recombination rates and hotspots across the human genome.
per: Myers, S, et al.
Publicat: (2005)

Dual processes and an invariance result for exchangeable models in population genetics.
per: Donnelly, P
Publicat: (1985)

Ancestral inference in population genetics models with selection
per: Stephens, M, et al.
Publicat: (2003)

High recombination rates and hotspots in a Plasmodium falciparum genetic cross.
per: Jiang, H, et al.
Publicat: (2011)

The asymptotic behavior of an urn model arising in population genetics
per: Donnelly, P, et al.
Publicat: (1996)

Comparison of fine-scale recombination rates in humans and chimpanzees.
per: Winckler, W, et al.
Publicat: (2005)

Estimation of Genetic Parameters for Milk Production Rate and Its Stability in Holstein Population
per: Hailiang Zhang, et al.
Publicat: (2024-09-01)

WEAK-CONVERGENCE TO A MARKOV-CHAIN WITH AN ENTRANCE BOUNDARY - ANCESTRAL PROCESSES IN POPULATION-GENETICS
per: Donnelly, P
Publicat: (1991)

Genealogical processes for Fleming-Viot models with selection and recombination
per: Donnelly, P, et al.
Publicat: (1999)

Recombination Rates, their local variation and the estimated number of hotspots in the human genome.
per: Stumpf, M, et al.
Publicat: (2003)

The influence of mutation, recombination, population history, and selection on patterns of genetic diversity in Neisseria meningitidis.
per: Jolley, K, et al.
Publicat: (2005)

A comparison of bayesian methods for haplotype reconstruction from population genotype data.
per: Stephens, M, et al.
Publicat: (2003)

Likelihoods and simulation methods for a class of nonneutral population genetics models.
per: Donnelly, P, et al.
Publicat: (2001)

Recombination and Genetic Diversity
per: Thamara Carvalho Coutinho, et al.
Publicat: (2012-12-01)

Molecular genetics of recombination/
per: Aguilera, Andres, et al.
Publicat: (2007)

Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates.
per: van Oers, K, et al.
Publicat: (2014)

A new statistical method for haplotype reconstruction from population data.
per: Stephens, M, et al.
Publicat: (2001)

Rapid evolution and the importance of recombination to the gastroenteric pathogen Campylobacter jejuni.
per: Wilson, D, et al.
Publicat: (2009)

The effects of human population structure on large genetic association studies.
per: Marchini, J, et al.
Publicat: (2004)

Genetic Engineering by DNA Recombineering
per: Papa, Louis John, et al.
Publicat: (2021)

Genetic recombination in bacteriophage lambda
per: Hillyar, C
Publicat: (2012)

Genetic recombination in bacteriophage lambda
per: Hillyar, C
Publicat: (2012)