CTL Escape and Codon Covariation in Subtypes B and C p17 (Matrix) and p24 (Capsid) Proteins

CTL Escape and Codon Covariation in Subtypes B and C p17 (Matrix) and p24 (Capsid) Proteins

Bibliográfalaš dieđut
Váldodahkkit:	Carlson, J, Brumme, Z, Rousseau, C, Brumme, C, Matthews, P, Kadie, C, Mullins, J, Walker, B, Harrigan, R, Goulder, P, Heckerman, D
Materiálatiipa:	Conference item
Almmustuhtton:	2008

Geahča maid

Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag.
Dahkki: Carlson, J, et al.
Almmustuhtton: (2008)

Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag.
Dahkki: Jonathan M Carlson, et al.
Almmustuhtton: (2008-11-01)

P09-10. Impact of CTL escape mutations in HIV-1 Nef on viral replication
Dahkki: Altfeld M, et al.
Almmustuhtton: (2009-10-01)

P09-18. Cw 0303/0304 HIV specific CTL response toward GagYL9 select for HIV escape variants with low fitness that is compensated by intra-codon variation
Dahkki: Honeyborne, I, et al.
Almmustuhtton: (2009)

P09-18. Cw*0303/0304 HIV specific CTL response toward GagYL9 select for HIV escape variants with low fitness that is compensated by intra-codon variation
Dahkki: Walker BD, et al.
Almmustuhtton: (2009-10-01)

The hypervariable HIV-1 capsid protein residues comprise HLA-driven CD8+ T-cell escape mutations and covarying HLA-independent polymorphisms.
Dahkki: Crawford, H, et al.
Almmustuhtton: (2011)

Cw*0303/0304 HIV specific CTL response toward GagYL9 select for HIV escape variants with low fitness that is compensated by intra-codon variation
Dahkki: Honeyborne, I, et al.
Almmustuhtton: (2009)

Widespread impact of HLA restriction on immune control and escape pathways of HIV-1.
Dahkki: Carlson, J, et al.
Almmustuhtton: (2012)

P09-19 LB. CTL escape mutations in gag epitopes restricted by protective HLA class I alleles cause substantial reductions in viral replication capacity
Dahkki: Walker B, et al.
Almmustuhtton: (2009-10-01)

HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins
Dahkki: Brumme, Zabrina L., et al.
Almmustuhtton: (2010)

HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins.
Dahkki: Zabrina L Brumme, et al.
Almmustuhtton: (2009-08-01)

Statistical resolution of ambiguous HLA typing data
Dahkki: Listgarten, J, et al.
Almmustuhtton: (2008)

P16-04. Cryptic CTL epitopes derived from antisense transcription are frequently recognized in HIV-1 infection
Dahkki: Bansal, A, et al.
Almmustuhtton: (2009)

P16-04. Cryptic CTL epitopes derived from antisense transcription are frequently recognized in HIV-1 infection
Dahkki: Goulder P, et al.
Almmustuhtton: (2009-10-01)

HIV and SIV CTL escape: implications for vaccine design.
Dahkki: Goulder, P, et al.
Almmustuhtton: (2004)

Gag-protease-mediated replication capacity in HIV-1 subtype C chronic infection: associations with HLA type and clinical parameters.
Dahkki: Wright, J, et al.
Almmustuhtton: (2010)

CTL escape - Progress in identifying therapeutic avenues to control HIV viraemia
Dahkki: Goulder, P
Almmustuhtton: (2000)

Statistical resolution of ambiguous HLA typing data
Dahkki: Listgarten, J, et al.
Almmustuhtton: (2008)

IN SILICO RESOLUTION OF AMBIGUOUS HLA TYPING DATA.
Dahkki: Listgarten, J, et al.
Almmustuhtton: (2008)

Genetic diversity and CTL escape burden in the replication-competent HIV reservoir in youth in a therapeutic HIV vaccine trial
Dahkki: Z.L. Brumme, et al.
Almmustuhtton: (2017-12-01)

HLA class I-driven evolution of human immunodeficiency virus type 1 subtype c proteome: immune escape and viral load.
Dahkki: Rousseau, C, et al.
Almmustuhtton: (2008)

P09-09. Impact of immune-driven sequence variation in HIV-1 subtype C Gag-Protease on viral fitness and disease progression
Dahkki: Wright, J, et al.
Almmustuhtton: (2009)

Cryptic CTL epitopes derived from antisense transcription are frequently recognized in HIV-1 infection
Dahkki: Bansal, A, et al.
Almmustuhtton: (2009)

Statistical resolution of ambiguous HLA typing data.
Dahkki: Jennifer Listgarten, et al.
Almmustuhtton: (2008-02-01)

Impact of transmitted CTL escape mutations on replicative capacity and HIV pathogenesis in early infection
Dahkki: Prince J, et al.
Almmustuhtton: (2012-09-01)

P09-09. Impact of immune-driven sequence variation in HIV-1 subtype C Gag-Protease on viral fitness and disease progression
Dahkki: Goulder PJ, et al.
Almmustuhtton: (2009-10-01)

Evolution and transmission of stable CTL escape mutations in HIV infection.
Dahkki: Goulder, P, et al.
Almmustuhtton: (2001)

OA06-03. Dynamics of CTL epitope escape and reversion in an African subtype C cohort
Dahkki: Allen S, et al.
Almmustuhtton: (2009-10-01)

P09-11. Reduced replication capacity of NL4-3 chimeric viruses encoding RT-Integrase sequences from HIV-1 elite controllers
Dahkki: Pereyra F, et al.
Almmustuhtton: (2009-10-01)

Influence of Gag-protease-mediated replication capacity on disease progression in individuals recently infected with HIV-1 subtype C.
Dahkki: Wright, J, et al.
Almmustuhtton: (2011)

HIV CTL escape: at what cost?
Dahkki: Smith Stephen M
Almmustuhtton: (2004-05-01)

Fitness cost of escape mutations in p24 Gag in association with control of human immunodeficiency virus type 1.
Dahkki: Martinez-Picado, J, et al.
Almmustuhtton: (2006)

CTL escape viral variants. I. Generation and molecular characterization.
Dahkki: Lewicki, H, et al.
Almmustuhtton: (1995)

Impact of immune-driven sequence variation in HIV-1 subtype C Gag-Protease on viral fitness and disease progression
Dahkki: Wright, J, et al.
Almmustuhtton: (2009)

HIV-1 viral escape in infancy followed by emergence of a variant-specific CTL response.
Dahkki: Feeney, M, et al.
Almmustuhtton: (2005)

HIV evolution: CTL escape mutation and reversion after transmission.
Dahkki: Leslie, A, et al.
Almmustuhtton: (2004)

Extensive intrasubtype recombination in South African human immunodeficiency virus type 1 subtype C infections.
Dahkki: Rousseau, C, et al.
Almmustuhtton: (2007)

CTL epitope escape and reversion in acute HCV infection.
Dahkki: Timm, J, et al.
Almmustuhtton: (2004)

Broad CTL Response in Early HIV Infection Drives Multiple Concurrent CTL Escapes.
Dahkki: Sivan Leviyang, et al.
Almmustuhtton: (2015-10-01)

Transmission and accumulation of CTL escape variants drive negative associations between HIV polymorphisms and HLA.
Dahkki: Leslie, A, et al.
Almmustuhtton: (2005)