HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa

<p><strong>Objectives:&nbsp;</strong>In low&ndash;middle-income countries, increasing levels of HIV drug resistance (HIVDR) on second-line protease inhibitor (PI)-based regimens are a cause for concern given the limited drug options for third-line antiretroviral therapy (AR...

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Main Authors: Chimukangara, B, Lessells, RJ, Sartorius, B, Gounder, L, Manyana, S, Pillay, M, Singh, L, Giandhari, J, Govender, K, Samuel, R, Msomi, N, Naidoo, K, de Oliveira, T, Moodley, P, Parboosing, R
Format: Journal article
Language:English
Published: Elsevier 2021
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author Chimukangara, B
Lessells, RJ
Sartorius, B
Gounder, L
Manyana, S
Pillay, M
Singh, L
Giandhari, J
Govender, K
Samuel, R
Msomi, N
Naidoo, K
de Oliveira, T
Moodley, P
Parboosing, R
author_facet Chimukangara, B
Lessells, RJ
Sartorius, B
Gounder, L
Manyana, S
Pillay, M
Singh, L
Giandhari, J
Govender, K
Samuel, R
Msomi, N
Naidoo, K
de Oliveira, T
Moodley, P
Parboosing, R
author_sort Chimukangara, B
collection OXFORD
description <p><strong>Objectives:&nbsp;</strong>In low&ndash;middle-income countries, increasing levels of HIV drug resistance (HIVDR) on second-line protease inhibitor (PI)-based regimens are a cause for concern given the limited drug options for third-line antiretroviral therapy (ART). We conducted a retrospective analysis of routine HIV-1 genotyping laboratory data from KwaZulu-Natal, South Africa, to describe the frequency and patterns of HIVDR mutations and their consequent impact on standardised third-line regimens.</p> <p><strong>Methods:&nbsp;</strong>This was a cross-sectional analysis of all HIV-1 genotypic resistance tests conducted by the National Health Laboratory Service in KwaZulu-Natal (January 2015 to December 2016) for adults and adolescents (age &ge;10 years) on second-line PI-based ART with virological failure. We assigned a third-line regimen to each record based on a national treatment algorithm and calculated the genotypic susceptibility score (GSS) for that regimen.</p> <p><strong>Results:&nbsp;</strong>Of 348 samples analysed, 287 (82.5%) had at least one drug resistance mutation (DRM) and 114 (32.8%) had at least one major PI DRM. Major PI resistance was associated with longer duration on second-line ART (aOR per 6-months&nbsp;=&nbsp;1.11, 95% CI 1.04&ndash;1.19) and older age (aOR&nbsp;=&nbsp;1.03, 95% CI 1.01&ndash;1.05). Of 112 patients requiring third-line ART, 12 (10.7%) had a GSS of &lt;2 for the algorithm-assigned third-line regimen.</p> <p><strong>Conclusion:&nbsp;</strong>One-third of people failing second-line ART had significant PI DRMs. A subgroup of these individuals had extensive HIVDR, where the predicted activity of third-line ART was suboptimal, highlighting the need for continuous evaluation of outcomes on third-line regimens and close monitoring for emergent HIV-1 integrase inhibitor resistance.</p>
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spelling oxford-uuid:d486dae5-250e-4be3-acd9-628a833d001f2023-10-18T06:52:38ZHIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South AfricaJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:d486dae5-250e-4be3-acd9-628a833d001fEnglishSymplectic ElementsElsevier2021Chimukangara, BLessells, RJSartorius, BGounder, LManyana, SPillay, MSingh, LGiandhari, JGovender, KSamuel, RMsomi, NNaidoo, Kde Oliveira, TMoodley, PParboosing, R<p><strong>Objectives:&nbsp;</strong>In low&ndash;middle-income countries, increasing levels of HIV drug resistance (HIVDR) on second-line protease inhibitor (PI)-based regimens are a cause for concern given the limited drug options for third-line antiretroviral therapy (ART). We conducted a retrospective analysis of routine HIV-1 genotyping laboratory data from KwaZulu-Natal, South Africa, to describe the frequency and patterns of HIVDR mutations and their consequent impact on standardised third-line regimens.</p> <p><strong>Methods:&nbsp;</strong>This was a cross-sectional analysis of all HIV-1 genotypic resistance tests conducted by the National Health Laboratory Service in KwaZulu-Natal (January 2015 to December 2016) for adults and adolescents (age &ge;10 years) on second-line PI-based ART with virological failure. We assigned a third-line regimen to each record based on a national treatment algorithm and calculated the genotypic susceptibility score (GSS) for that regimen.</p> <p><strong>Results:&nbsp;</strong>Of 348 samples analysed, 287 (82.5%) had at least one drug resistance mutation (DRM) and 114 (32.8%) had at least one major PI DRM. Major PI resistance was associated with longer duration on second-line ART (aOR per 6-months&nbsp;=&nbsp;1.11, 95% CI 1.04&ndash;1.19) and older age (aOR&nbsp;=&nbsp;1.03, 95% CI 1.01&ndash;1.05). Of 112 patients requiring third-line ART, 12 (10.7%) had a GSS of &lt;2 for the algorithm-assigned third-line regimen.</p> <p><strong>Conclusion:&nbsp;</strong>One-third of people failing second-line ART had significant PI DRMs. A subgroup of these individuals had extensive HIVDR, where the predicted activity of third-line ART was suboptimal, highlighting the need for continuous evaluation of outcomes on third-line regimens and close monitoring for emergent HIV-1 integrase inhibitor resistance.</p>
spellingShingle Chimukangara, B
Lessells, RJ
Sartorius, B
Gounder, L
Manyana, S
Pillay, M
Singh, L
Giandhari, J
Govender, K
Samuel, R
Msomi, N
Naidoo, K
de Oliveira, T
Moodley, P
Parboosing, R
HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa
title HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa
title_full HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa
title_fullStr HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa
title_full_unstemmed HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa
title_short HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa
title_sort hiv 1 drug resistance in adults and adolescents on protease inhibitor based antiretroviral therapy in kwazulu natal province south africa
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