PhyloPars: estimation of missing parameter values using phylogeny.

PhyloPars: estimation of missing parameter values using phylogeny.

A wealth of information on metabolic parameters of a species can be inferred from observations on species that are phylogenetically related. Phylogeny-based information can complement direct empirical evidence, and is particularly valuable if experiments on the species of interest are not feasible....

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí:	Bruggeman, J, Heringa, J, Brandt, B
Formáid:	Journal article
Teanga:	English
Foilsithe / Cruthaithe:	2009

Míreanna comhchosúla

Using PhyloSuite for molecular phylogeny and tree‐based analyses
de réir: Chuan‐Yu Xiang, et al.
Foilsithe / Cruthaithe: (2023-02-01)

Assessment of phylo-functional coherence along the bacterial phylogeny and taxonomy
de réir: Marcos Parras-Moltó, et al.
Foilsithe / Cruthaithe: (2021-04-01)

PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny.
de réir: Rahul Siddharthan, et al.
Foilsithe / Cruthaithe: (2005-12-01)

PhyloMed: a phylogeny-based test of mediation effect in microbiome
de réir: Qilin Hong, et al.
Foilsithe / Cruthaithe: (2023-04-01)

phyloMDA: an R package for phylogeny-aware microbiome data analysis
de réir: Tiantian Liu, et al.
Foilsithe / Cruthaithe: (2022-06-01)

PhyloMissForest: a random forest framework to construct phylogenetic trees with missing data
de réir: Diogo Pinheiro, et al.
Foilsithe / Cruthaithe: (2022-05-01)

Estimating field metabolic rates for Australian marsupials using phylogeny.
de réir: Riek, A, et al.
Foilsithe / Cruthaithe: (2013)

DeepPhylo: Phylogeny‐Aware Microbial Embeddings Enhanced Predictive Accuracy in Human Microbiome Data Analysis
de réir: Bin Wang, et al.
Foilsithe / Cruthaithe: (2024-12-01)

PhyloFunc: phylogeny-informed functional distance as a new ecological metric for metaproteomic data analysis
de réir: Luman Wang, et al.
Foilsithe / Cruthaithe: (2025-02-01)

BIO::Phylo-phyloinformatic analysis using perl
de réir: Hartmann Klaas, et al.
Foilsithe / Cruthaithe: (2011-02-01)

V.PhyloMaker2: An updated and enlarged R package that can generate very large phylogenies for vascular plants
de réir: Yi Jin, et al.
Foilsithe / Cruthaithe: (2022-07-01)

PhyloMarker–-A Tool for Mining Phylogenetic Markers through Genome Comparison: Application of the Mouse Lemur (Genus ) Phylogeny
de réir: Runhua Lei, et al.
Foilsithe / Cruthaithe: (2012-01-01)

ReproPhylo: An Environment for Reproducible Phylogenomics.
de réir: Amir Szitenberg, et al.
Foilsithe / Cruthaithe: (2015-09-01)

PhyloSift: phylogenetic analysis of genomes and metagenomes
de réir: Aaron E. Darling, et al.
Foilsithe / Cruthaithe: (2014-01-01)

On the use of cartographic projections in visualizing phylo-genetic tree space
de réir: Clement Mark, et al.
Foilsithe / Cruthaithe: (2010-06-01)

Auto-phylo v2 and auto-phylo-pipeliner: building advanced, flexible, and reusable pipelines for phylogenetic inferences, estimation of variability levels and identification of positively selected amino acid sites
de réir: López-Fernández Hugo, et al.
Foilsithe / Cruthaithe: (2024-03-01)

PhyloFinder: An intelligent search engine for phylogenetic tree databases
de réir: Bansal Mukul S, et al.
Foilsithe / Cruthaithe: (2008-03-01)

phyloXML: XML for evolutionary biology and comparative genomics
de réir: Zmasek Christian M, et al.
Foilsithe / Cruthaithe: (2009-10-01)

PhyloPat: phylogenetic pattern analysis of eukaryotic genes
de réir: de Vlieg Jacob, et al.
Foilsithe / Cruthaithe: (2006-09-01)

PhyloFisher: A phylogenomic package for resolving eukaryotic relationships.
de réir: Alexander K Tice, et al.
Foilsithe / Cruthaithe: (2021-08-01)

Phylo2Vec: a vector representation for binary trees
de réir: Penn, MJ, et al.
Foilsithe / Cruthaithe: (2024)

PhyloPrimer: a taxon-specific oligonucleotide design platform
de réir: Gilda Varliero, et al.
Foilsithe / Cruthaithe: (2021-04-01)

Statistical power of phylo-HMM for evolutionarily conserved element detection
de réir: Schadt Eric E, et al.
Foilsithe / Cruthaithe: (2007-10-01)

Phylo-evo-devo: combining phylogenetics with evolutionary developmental biology
de réir: Minelli Alessandro
Foilsithe / Cruthaithe: (2009-06-01)

The PhyloPythiaS web server for taxonomic assignment of metagenome sequences.
de réir: Kaustubh Raosaheb Patil, et al.
Foilsithe / Cruthaithe: (2012-01-01)

Deep Sequencing to Reveal Phylo-Geographic Relationships of Juquitiba Virus in Paraguay
de réir: Evans Ifebuche Nnamani, et al.
Foilsithe / Cruthaithe: (2023-08-01)

A scientometric investigation on the impact of the PhyloCode proposal on the scientific literature
de réir: DANIEL C. SCHELESKY-PRADO, et al.
Foilsithe / Cruthaithe: (2024-11-01)

PhyloPlus: a Universal Tool for Phylogenetic Interrogation of Metagenomic Communities
de réir: Xinyang Huang, et al.
Foilsithe / Cruthaithe: (2023-02-01)

rphylopic: An R package for fetching, transforming, and visualising PhyloPic silhouettes
de réir: William Gearty, et al.
Foilsithe / Cruthaithe: (2023-11-01)

XRate: a fast prototyping, training and annotation tool for phylo-grammars
de réir: Kosiol Carolin, et al.
Foilsithe / Cruthaithe: (2006-10-01)

ColorPhylo: A Color Code to Accurately Display Taxonomic Classifications
de réir: Sylvain Lespinats, et al.
Foilsithe / Cruthaithe: (2011-11-01)

ColorPhylo: A Color Code to Accurately Display Taxonomic Classifications
de réir: Sylvain Lespinats, et al.
Foilsithe / Cruthaithe: (2011-01-01)

PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees
de réir: Pontarotti Pierre, et al.
Foilsithe / Cruthaithe: (2009-09-01)

Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics
de réir: Seong-Hwan Jun, et al.
Foilsithe / Cruthaithe: (2023-02-01)

PhyloScan: identification of transcription factor binding sites using cross-species evidence
de réir: Newberg Lee A, et al.
Foilsithe / Cruthaithe: (2007-01-01)

Corrigendum to “V.PhyloMaker2: An updated and enlarged R package that can generate very large phylogenies for vascular plants” [Plant Divers. 44 (2022) 335–339]
de réir: Yi Jin, et al.
Foilsithe / Cruthaithe: (2023-01-01)

PhyloNext: a pipeline for phylogenetic diversity analysis of GBIF-mediated data
de réir: Vladimir Mikryukov, et al.
Foilsithe / Cruthaithe: (2024-06-01)

PrePhyloPro: phylogenetic profile-based prediction of whole proteome linkages
de réir: Yulong Niu, et al.
Foilsithe / Cruthaithe: (2017-08-01)

BuscoPhylo: a webserver for Busco-based phylogenomic analysis for non-specialists
de réir: Alae-Eddine Sahbou, et al.
Foilsithe / Cruthaithe: (2022-10-01)

Phylo_dCor: distance correlation as a novel metric for phylogenetic profiling
de réir: Gabriella Sferra, et al.
Foilsithe / Cruthaithe: (2017-09-01)